PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003752.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 365aa MW: 40903.1 Da PI: 5.206

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2e-11	208	251	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr ++Pk + K++ +iL +++Y+k+L XP_023003752.1 208 LMAERRRRRRLNDRLSMLRAIVPKiS------KMDRTSILGDTIDYVKEL 251 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MFIIFPQLGA IPCSYYSVFH FLHTRRGKKM ELTQYGFLEE LLASTPWTSS SSSSTYSNGF 60 NDFFPNGCNF SSFDEIPQMG TSISPHFPGF QTPTDFSFAD QHLYGSFLEG FALPEVDSSS 120 YTKNNETPPF VSVEEISNKN SGFPPTAMEE EEEELGFMEC EAAPNVCKQE MEVMGGRETN 180 DSKMGVAELG KRRSNKAKKL DGQPSKNLMA ERRRRRRLND RLSMLRAIVP KISKMDRTSI 240 LGDTIDYVKE LLERINNLKE EDSNHASLNG ISKERKSNQV LFDVERKERE TRIGICCTTR 300 PGLLLSTVNT LEALGLEIQQ CVISCFNDFS MQASCSEGSS QKAVPSSDDI KEALFRNAGY 360 GGKCL

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MFIIFPQLGA IPCSYYSVFH FLHTRRGKKM ELTQYGFLEE LLASTPWTSS SSSSTYSNGF  60
NDFFPNGCNF SSFDEIPQMG TSISPHFPGF QTPTDFSFAD QHLYGSFLEG FALPEVDSSS  120
YTKNNETPPF VSVEEISNKN SGFPPTAMEE EEEELGFMEC EAAPNVCKQE MEVMGGRETN  180
DSKMGVAELG KRRSNKAKKL DGQPSKNLMA ERRRRRRLND RLSMLRAIVP KISKMDRTSI  240
LGDTIDYVKE LLERINNLKE EDSNHASLNG ISKERKSNQV LFDVERKERE TRIGICCTTR  300
PGLLLSTVNT LEALGLEIQQ CVISCFNDFS MQASCSEGSS QKAVPSSDDI KEALFRNAGY  360
GGKCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	211	218	ERRRRRRL
2	212	217	RRRRRR
3	215	222	RRRLNDRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	3e-67	bHLH family protein