PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023003268.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 308aa MW: 33218.9 Da PI: 8.9551 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.1 | 2e-18 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v+++G+++W++I+r + gR++k+c++rw + XP_023003268.1 12 KGPWSPEEDDALQRLVQKHGPRNWSLISRSIH-GRSGKSCRLRWCNQ 57 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 52 | 1.6e-16 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEde +++a++ G++ W+tIar + gRt++ +k++w++ XP_023003268.1 66 PFSPEEDETIIRAHANXGNR-WATIARLLS-GRTDNAVKNHWNST 108 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MAVNRNEMDR IKGPWSPEED DALQRLVQKH GPRNWSLISR SIHGRSGKSC RLRWCNQLSP 60 QVEHRPFSPE EDETIIRAHA NXGNRWATIA RLLSGRTDNA VKNHWNSTLK RKCSSMMNEG 120 FEGESNNQPL KKSFSAGAAV NISNGLYMSP GSPSGSDRSD SSVPVVSPIV YRPVARTGSV 180 IPPGESTLSS ATDPPTSLSL SLPGVGAAGE SSNREGSGST AQVPLLAAFA QIQSMAASEL 240 ARASQLDNRP DESAEKINGF GIFSADLMAV MQEMIRSEVK SYMEGLSDPR GRGCFQQAKA 300 GGIRNVGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 2e-80 | MYB family protein |