PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003055.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 412aa MW: 47172.3 Da PI: 10.0384

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003055.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.5	1.6e-15	14	99	8	98
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++l+ + l++pkkf++++g+ s+ ++l+ ++g +W+v l + +++ ++l++GW +F++ L+ g +vFk dg s+f ++f+ XP_023003055.1 14 HNNLEDRKLMIPKKFVKDYGE--LLSTSVRLKLPDGMEWKVGL--TTAPNGvVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTF--QTSIFD 99 55677778*********84..58999***********..77777779**********************5554555..777776 PP
2	B3	62.1	8.8e-20	201	287	1	88
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrs 88 f+ v+++++v + +++pk+fae+h ++l++++gr+W + ++ r++++ +++++GWk+Fv++n LkegD+ +F+l++++ XP_023003055.1 201 FKIVMKQPNVRGKFAMIIPKDFAEKHlpddF------GIIKLRTPNGRKWPLLYKRRRNQENfVYFSSGWKRFVEENVLKEGDVGLFQLIKKD 287 677899999999************64321......26***********775444446***********************99754 PP
3	B3	40.6	4.6e-13	318	404	8	99
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + +k+ l +p fa++h + s +l++ + r+W v l r++++++ l++GW F +ngL++gD+++F+++++++ ++v++f++ XP_023003055.1 318 NRRHKKFVLNIPMVFAKAHFSTDMLSAKLQVGN---RQWIVAL--RQYGSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKH 404 5667788899*******76766766666554...***..*****************************9987666678888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MAASSPQFFR IVLHNNLEDR KLMIPKKFVK DYGELLSTSV RLKLPDGMEW KVGLTTAPNG 60 VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI LHDSRAEFTM 120 EDEDSDENTE SSPQRLSKRK NNASVPSPPQ SRKKMKPEEE GCLIMKNMPK TEAGVSSRRQ 180 QFVNKPEAAQ RLTSKSDKPS FKIVMKQPNV RGKFAMIIPK DFAEKHLPDD FGIIKLRTPN 240 GRKWPLLYKR RRNQENFVYF SSGWKRFVEE NVLKEGDVGL FQLIKKDIFS FTKLQDTPPF 300 ASPPTKTRNP CFKANILNRR HKKFVLNIPM VFAKAHFSTD MLSAKLQVGN RQWIVALRQY 360 GSSVRLSAGW CLFYGDNGLE DGDSCLFEMV DTKNCVFKVT IFKHVSSSAS MD

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MAASSPQFFR IVLHNNLEDR KLMIPKKFVK DYGELLSTSV RLKLPDGMEW KVGLTTAPNG  60
VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI LHDSRAEFTM  120
EDEDSDENTE SSPQRLSKRK NNASVPSPPQ SRKKMKPEEE GCLIMKNMPK TEAGVSSRRQ  180
QFVNKPEAAQ RLTSKSDKPS FKIVMKQPNV RGKFAMIIPK DFAEKHLPDD FGIIKLRTPN  240
GRKWPLLYKR RRNQENFVYF SSGWKRFVEE NVLKEGDVGL FQLIKKDIFS FTKLQDTPPF  300
ASPPTKTRNP CFKANILNRR HKKFVLNIPM VFAKAHFSTD MLSAKLQVGN RQWIVALRQY  360
GSSVRLSAGW CLFYGDNGLE DGDSCLFEMV DTKNCVFKVT IFKHVSSSAS MD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-31	B3 family protein