PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002946.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 397aa    MW: 43698.4 Da    PI: 5.3583
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.99.6e-052933251754
                     HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++   L++l+ +      +K + a++L +A+eYIk L
  XP_023002946.1 293 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKFL 325
                     55666677777776.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MAEDFQAAIC GDNWWSFSRN MMVTVGGLSP CSVGIGDLGW PPADDFLDIK PKSATDSDHN  60
NNSMLFQDYS TFQMMGFALS SSTTSDHWNQ PDGLLCGGGR GESNFNSNGI ERYKDEEITR  120
SFTSDSSFIN GLKQGDDEDY NMLEQNGLMS TTNTPTCQGL FPLDSTLYGY PHQQQQQQQP  180
PPPHAHSLFN STHPQPQPVS AALHFANNTP FWNAPTAASS THIPQGIASL LEQKSAKSQN  240
SLKPINNGNC ENGQEPKKGD KNSANESVPV FKRPRIETPS PLPTFKVRKE KLGDRVTALQ  300
QLVSPFGKTD TASVLHEAIE YIKFLHDQVL STPYMKSNNG ITPTQQHQQV CEKEDPDCPK  360
QDLRSRGLCL VPVSSTFPVS NVGTADFWTP TFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.13e-55bHLH family protein