PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002803.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 323aa    MW: 36441.1 Da    PI: 4.5637
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.5e-12165208654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  A++Y+k+L
  XP_023002803.1 165 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTAILADAIDYMKEL 208
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MELDEHGFLE ELMALRREAN WDAIPTEMAD LNAWAFDYCF DHNISNFNPN SSSEPLSTQN  60
LDEFYHPLAN EFSAPQMADS AYAAMEVAAP LPFQAERPNV EGEEEEEELG FLANEIQNME  120
AVQVQSACKA EPIQSPELPV FNIGTCSLER KNGPKKLQGQ PSKNLMAERR RRKRLNDRLS  180
MLRSIVPKIS KMDRTAILAD AIDYMKELLE KIGSLQREMD RTNQTTRNSF HDTKPSELVV  240
RNSPKFEVES RNGNTRIEIY CAAKPGLLLS TVNTIEALGL EIQHCVISCF NDFALQATCS  300
QELKPEELKE ALFRNAGYGG SCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168175ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-73bHLH family protein