PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002637.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 557aa MW: 62731.9 Da PI: 5.0311

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.8	1.4e-24	198	251	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fveav+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_023002637.1 198 KARVVWSVDLHQKFVEAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 251 68*****************.9*****************************8 PP
2	Myb_DNA-binding	38.6	2.4e-12	200	250	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_023002637.1 200 RVVWSVDLHQKFVEAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 250 678***********************************************7 PP
3	Response_reg	82.5	1.3e-27	19	127	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ ++eal ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_023002637.1 19 VLVVDDDPTWLKILEKMLKKCSY-EVTTCCLAREALSLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 111 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_023002637.1 112 ACDYLLKPIRMKELRN 127 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MESGFSSPRS DVFPVGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCCLAR EALSLLRERK 60 DGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI 120 RMKELRNIWQ HVLRKKIQEG RDIEGHDVFE GLQILRNGSD RYDDSQFLRV EELFSVRKRK 180 DVDKYEEKEF GETCSTKKAR VVWSVDLHQK FVEAVNQIGF DKVGPKKILD LMNVPWLTRE 240 NVASHLQKYR LYLSRLQKEN DPKACFVVGM KQTDSSLKDG DGNFSVCSSL GVPQTDVTNS 300 SFSFSGDNFL QNVDSIGCEA DRKRVVQEQT SEPKRAAATE LIKTRCTHMK FNNSFASVES 360 EGKLAACYPW VEAPQMKLKQ ESKPHQVQIN QLPSVSSISS GRSATEKDKG SSIESKAPYS 420 EDCSQPMVHL NPPKASTDSC SGKAKSFNEI NDHFEPISTA TAPLGVKNQN VIDLSSISTD 480 LGSGFPFSSF DEDLQGYLFQ DGCYPKNLEQ IIEFPDYGDP GIFTEGPTHL YDAMRFGYEY 540 SYDPTEYPVI DEGLFIA

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MESGFSSPRS DVFPVGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCCLAR EALSLLRERK  60
DGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVLRKKIQEG RDIEGHDVFE GLQILRNGSD RYDDSQFLRV EELFSVRKRK  180
DVDKYEEKEF GETCSTKKAR VVWSVDLHQK FVEAVNQIGF DKVGPKKILD LMNVPWLTRE  240
NVASHLQKYR LYLSRLQKEN DPKACFVVGM KQTDSSLKDG DGNFSVCSSL GVPQTDVTNS  300
SFSFSGDNFL QNVDSIGCEA DRKRVVQEQT SEPKRAAATE LIKTRCTHMK FNNSFASVES  360
EGKLAACYPW VEAPQMKLKQ ESKPHQVQIN QLPSVSSISS GRSATEKDKG SSIESKAPYS  420
EDCSQPMVHL NPPKASTDSC SGKAKSFNEI NDHFEPISTA TAPLGVKNQN VIDLSSISTD  480
LGSGFPFSSF DEDLQGYLFQ DGCYPKNLEQ IIEFPDYGDP GIFTEGPTHL YDAMRFGYEY  540
SYDPTEYPVI DEGLFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-122	ARR-B family protein