PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002636.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 285aa    MW: 31700.2 Da    PI: 10.5077
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.53.5e-1498142347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r++ ++Rt+ q+ s+ qky
   XP_023002636.1  98 PWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKY 142
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MVRKCSHCGN VGHNSRTCII QKEKIRGKFK LFGVHLDGVS SSSAAATAGA AAAALLKKSI  60
SLDCLPSSSS SSSCEKLSNG YLSDDLITKT HERKKGVPWT EEEHRMFLVG LQKLGKGDWR  120
GISRKFVTTR TPTQVASHAQ KYFLRLNSLD KRKHRRPSLF DVATMDKFRV QVVKVNNSKP  180
SSLPPSISFG IPSNSTPIHN HVHQSLLPIW FGYEDHKAFK FLENPIKCSN SSSHFHGKQK  240
TESHHQAPDL QLSLSTPKPV EQAEQQQQQP HCCRNIRING AISVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150157DKRKHRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-55MYB_related family protein