PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002559.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 99aa    MW: 11217.4 Da    PI: 7.6688
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.71.1e-071358346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                      W+    + + +a + + ++   +W + a  +g g+t++++k ++ +
   XP_023002559.1 13 VWSSKQNKVFENALTVYDKDspdRWQKLAGAVG-GKTAEEVKRHYEM 58
                     7********************************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MSSSSSSSSS SNVWSSKQNK VFENALTVYD KDSPDRWQKL AGAVGGKTAE EVKRHYEMLV  60
EDVHNIEIGR IPLPNYSNSS KQYYSNFLDE EQRLKGLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.21e-28MYB_related family protein