PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023002447.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 302aa MW: 34249.8 Da PI: 6.3669 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.8 | 1.6e-12 | 114 | 166 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P + + ++ + a+i A++++k+L+ XP_023002447.1 114 QRMTHIAVERNRRKQMNEYLAVLRSLMPCS---YVQRqGDQASIIGGAINFVKELE 166 79***************************7...66666***************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MMALETVVYP QNRDTFTYVC RDFCSYGSAW PGYDYGFQLE QEKSFLENPQ KLPTNWEPSP 60 EECSINQPLS VGALYPPMEV EQSPPSPPSP PPTTGRRKRR RTRNMKNKEE IENQRMTHIA 120 VERNRRKQMN EYLAVLRSLM PCSYVQRQGD QASIIGGAIN FVKELEQQLQ FIKAHKEPTA 180 SSPFADFFSF PQFSTPATNS THDSASSNTQ WAAGDIEVTM VDTHANLKIL SKKRPRQLLK 240 MVAGFQSLRF SVLHLNVTTL DQMVLYSVSI KIEEGCELNT VDEIAAAVNQ ILLSIQEESA 300 FS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 101 | RKRRR |
2 | 97 | 102 | RKRRRT |
3 | 115 | 126 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 2e-79 | bHLH family protein |