PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001863.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 390aa    MW: 42473.3 Da    PI: 4.6914
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001863.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.65.6e-16210246135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_023001863.1 210 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 246
                     *******99*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MAAANPQPLQ ARPFQEHVQV PSMMGDDDGE YEDGGGGGGG GGGGGGGDVM DDVEEARMTS  60
VSVANLGGLV MASRTSELTL SFEGEVYVFP AVTPEKVQAV LLLLGGRDVP TSVPTMEVPY  120
DHINRGMVDT PKRSNLSRRI ASLVRFREKR KERCFDKKIR YTVRKEVAQR MHRKNGQFAS  180
LKESSGASSW ESAHSCLQDG TRSETVLRKC QHCGVSENNT PAMRRGPAGP RTLCNACGLM  240
WANKGTLRDL SKGGRNVSVD HTEPETPMDV KPTIMEGEFS GIPDEHVLLY FSLHYKYSFH  300
LASLCYLQAN AHTICMQGTP EDPGKTMTEG SSNPSVDLDE EEDINETTGG QTNSLPMQIV  360
NDSTNDDEQE PLIELANPSD TDIDIPTNFD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129134DTPKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-66GATA family protein