PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001857.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 625aa MW: 66740.5 Da PI: 7.8328

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.2	8e-08	201	245	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l avk+ G g+W+ I r + Rt+ q+ rw XP_023001857.1 201 RKPWSEAEDLELMAAVKKCGEGNWANILRgdFLS-DRTASQLSQRW 245 789************************9822354.77777777777 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
MKLKKRSVSE KDISTFLPRY SPTTVLTLLQ EVSQVSEAKP KIDWNEIVKN TSTGISNPRE 60 YQMLWRHLAY RHALLDNLED ETAPLEDDSD LECELEPFPS FSCETSTEAA ACAKVFIASG 120 SSSHLSLPSS STIEAPLTIN LPRSYMAGFQ FEDADPACSI RGASITVPVS VQRQPVLTPP 180 SAEGLTTNGS TYGNNASRRK RKPWSEAEDL ELMAAVKKCG EGNWANILRG DFLSDRTASQ 240 LSQRWAIIKK RHGNLNVGAN TAGTQLSEVQ LAARHAMSLA LDRPVGSLKA ARISGSASTN 300 TIGNGSSLAP VASSEQVQDK LHQSPTHTKP HPVGSSSLTA KAQVTASKKM IPKSSFDSDC 360 IVRAAAVAAG ARIASPADAA SLLKAAQSKN AIHIMAKVPA STKTPTPARG PNHLDAHPSI 420 KTTTLPHTSA VMPSVTHGGG PVKITSSTTA TLSSAPTDQN ISVASVTAAA NPLSEKETKT 480 TEETRGLGLG GVQATAQKDC RSRQSISERV QEEKPADLGP PLKRQATETS NCSSSQTTST 540 ADVDIKVESN QVEERQNTNT SMIPDSSNQQ GITNQSQVER TKPQDMDIDN DGKDRPIMKT 600 DGRSENSVHK EAASEFWKGN TKDTN

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

MKLKKRSVSE KDISTFLPRY SPTTVLTLLQ EVSQVSEAKP KIDWNEIVKN TSTGISNPRE  60
YQMLWRHLAY RHALLDNLED ETAPLEDDSD LECELEPFPS FSCETSTEAA ACAKVFIASG  120
SSSHLSLPSS STIEAPLTIN LPRSYMAGFQ FEDADPACSI RGASITVPVS VQRQPVLTPP  180
SAEGLTTNGS TYGNNASRRK RKPWSEAEDL ELMAAVKKCG EGNWANILRG DFLSDRTASQ  240
LSQRWAIIKK RHGNLNVGAN TAGTQLSEVQ LAARHAMSLA LDRPVGSLKA ARISGSASTN  300
TIGNGSSLAP VASSEQVQDK LHQSPTHTKP HPVGSSSLTA KAQVTASKKM IPKSSFDSDC  360
IVRAAAVAAG ARIASPADAA SLLKAAQSKN AIHIMAKVPA STKTPTPARG PNHLDAHPSI  420
KTTTLPHTSA VMPSVTHGGG PVKITSSTTA TLSSAPTDQN ISVASVTAAA NPLSEKETKT  480
TEETRGLGLG GVQATAQKDC RSRQSISERV QEEKPADLGP PLKRQATETS NCSSSQTTST  540
ADVDIKVESN QVEERQNTNT SMIPDSSNQQ GITNQSQVER TKPQDMDIDN DGKDRPIMKT  600
DGRSENSVHK EAASEFWKGN TKDTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	5e-72	MYB_related family protein