PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001650.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 599aa MW: 64742.5 Da PI: 7.7577

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.7	6.5e-30	257	316	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ XP_023001650.1 257 MNDGCQWRKYGQKIAKGNPCPRAYYRCTGSpTCPVRKQVQRCADDMSILITTYEGNHNHP 316 58************************888**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MEAAAPAFGR PRPVVKPEKP AGDSDDDRDS PSNQHLLIKR ENRAKEENES EDKTSHSSDQ 60 NDLRCTKIQE EQLESARTEM GEVREENQRL KMSLGQIMKD YEALKMQFLG IVGREAKKLP 120 EHNKEQQQRP HDDQTEETEL VSLTLGRYPM AEKKKAVEEK NINGGDKEEV VKQALSLGLN 180 CKFEQESTAA TVKEANSPNR SLTISADHET KEDAGETNWP PSKGLKTMRS VDDDALPTNP 240 PKRARVCVRA RCETTTMNDG CQWRKYGQKI AKGNPCPRAY YRCTGSPTCP VRKQVQRCAD 300 DMSILITTYE GNHNHPLPAS ATAMASTTSA AASMLLSGSS TSSAPNTTAA ASSSSSSSSH 360 ALSFYSNSKQ NFYLPNNSSI ISSTSPTHPT ITLDLTSNPS SSSSNPSTHF GKFPSSFPNS 420 RYPFTSQLDF GSSRNNVLSW NNGVLSYNRN NHPTTTPTNN IYQNYLQHQR NTAMSLPHQQ 480 PPLPDTIAAA TKAITADPSF QSALAAALTS IIGSGGTSAG TVKSSARGEQ PLFQLTSTAT 540 TTTNKGNGCG TSFLSNITTA TPSNSPPTGN MAFVPANSLP FSNPKSASAS PGDHIDLTN

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MEAAAPAFGR PRPVVKPEKP AGDSDDDRDS PSNQHLLIKR ENRAKEENES EDKTSHSSDQ  60
NDLRCTKIQE EQLESARTEM GEVREENQRL KMSLGQIMKD YEALKMQFLG IVGREAKKLP  120
EHNKEQQQRP HDDQTEETEL VSLTLGRYPM AEKKKAVEEK NINGGDKEEV VKQALSLGLN  180
CKFEQESTAA TVKEANSPNR SLTISADHET KEDAGETNWP PSKGLKTMRS VDDDALPTNP  240
PKRARVCVRA RCETTTMNDG CQWRKYGQKI AKGNPCPRAY YRCTGSPTCP VRKQVQRCAD  300
DMSILITTYE GNHNHPLPAS ATAMASTTSA AASMLLSGSS TSSAPNTTAA ASSSSSSSSH  360
ALSFYSNSKQ NFYLPNNSSI ISSTSPTHPT ITLDLTSNPS SSSSNPSTHF GKFPSSFPNS  420
RYPFTSQLDF GSSRNNVLSW NNGVLSYNRN NHPTTTPTNN IYQNYLQHQR NTAMSLPHQQ  480
PPLPDTIAAA TKAITADPSF QSALAAALTS IIGSGGTSAG TVKSSARGEQ PLFQLTSTAT  540
TTTNKGNGCG TSFLSNITTA TPSNSPPTGN MAFVPANSLP FSNPKSASAS PGDHIDLTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	3e-61	WRKY family protein