PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001131.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 573aa MW: 63902.7 Da PI: 8.4178

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.6	6.9e-11	265	324	2	55
HHHHHHHHHHHHHHHHH..........HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNs..........afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN+ +f++LrellP + ++K +Ka+ L +++eYI+ Lq XP_023001131.1 265 RSKHSATEQRRRSKINDrqdftdiftcRFQKLRELLPCS----DQKRDKASFLLEVIEYIQFLQ 324 889************55555555555******9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MELPQPSRPL RTEGRKPTHD FLSLYSHSTA DQQDPSQSFQ GGFLTTHDFL QPLERIEKTC 60 AKKEHTMNVS TVERAAPPLT TLARNSPVER LLPGGIGSCI IGHISYFNHR VPKTEGSVFP 120 VPQASNTDKS DDNSRCSSLS ASGFTLWEES AVKKGKTRKE NLSEKPGLRE PPAKMEQWAV 180 STERPIQSSC SSFSSLSSSQ PSCQQKRSFG EMLKSAANVT SKEEKLDDGK AFVIKKESSP 240 STAYRGDLRI NVGGKCSDQK ANTPRSKHSA TEQRRRSKIN DRQDFTDIFT CRFQKLRELL 300 PCSDQKRDKA SFLLEVIEYI QFLQEKVRKY ESSPPQGWYD EPAKLLHCRN NCNPAQCYID 360 QSQVAKSGPV FIFAGSDQKN MSHFPAFLPR CSHNPVESNT STTFGEADHH LGTTNKATSY 420 PMLDPRYFIP VTSEGEKTKI YSQVAHNADK KPYEMQQLLW ETRACTTDIA AVDNKLKEPE 480 QSIEGGRISI SSAYSQELLK ILTQALQSSG VDMSQASIAV QIELGKRTNC RDTAANPAIV 540 DDSARPSERA VVVSRVAAVE EDMEQAFRKK QNT

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MELPQPSRPL RTEGRKPTHD FLSLYSHSTA DQQDPSQSFQ GGFLTTHDFL QPLERIEKTC  60
AKKEHTMNVS TVERAAPPLT TLARNSPVER LLPGGIGSCI IGHISYFNHR VPKTEGSVFP  120
VPQASNTDKS DDNSRCSSLS ASGFTLWEES AVKKGKTRKE NLSEKPGLRE PPAKMEQWAV  180
STERPIQSSC SSFSSLSSSQ PSCQQKRSFG EMLKSAANVT SKEEKLDDGK AFVIKKESSP  240
STAYRGDLRI NVGGKCSDQK ANTPRSKHSA TEQRRRSKIN DRQDFTDIFT CRFQKLRELL  300
PCSDQKRDKA SFLLEVIEYI QFLQEKVRKY ESSPPQGWYD EPAKLLHCRN NCNPAQCYID  360
QSQVAKSGPV FIFAGSDQKN MSHFPAFLPR CSHNPVESNT STTFGEADHH LGTTNKATSY  420
PMLDPRYFIP VTSEGEKTKI YSQVAHNADK KPYEMQQLLW ETRACTTDIA AVDNKLKEPE  480
QSIEGGRISI SSAYSQELLK ILTQALQSSG VDMSQASIAV QIELGKRTNC RDTAANPAIV  540
DDSARPSERA VVVSRVAAVE EDMEQAFRKK QNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	3e-86	bHLH family protein