PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023001002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | WRKY | ||||||||
Protein Properties | Length: 271aa MW: 29376.4 Da PI: 5.0311 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 72.8 | 4.6e-23 | 79 | 133 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr C+s+ gCp++k+ver++ dp+++ itY+ eHnh+ XP_023001002.1 79 SDSWAWRKYGQKPIKGSPYPR----CSSSkGCPARKQVERNRLDPTMLLITYSCEHNHS 133 69****************996....99888****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MDDVTFNNNH QFYSVDLLED SDEFKAAPDS PPPPPPPPLP PNSTAAAKKG RRGMKKKVVS 60 VRINGDGPRN SSGSTTPPSD SWAWRKYGQK PIKGSPYPRC SSSKGCPARK QVERNRLDPT 120 MLLITYSCEH NHSGPVSRNN NHHQAAAVKP TSPETVPVHP EPEPEAEEKF VESLEDQFSW 180 FGEMETTSST VLESSIFSGR SSSGVGDSIS SDVAMPFPMG DDDVDDSLFA DLGELPECSV 240 VFRHGGGPGL PVDEQPATSQ RRITPWCGAT T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 6e-50 | WRKY family protein |