PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000958.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 253aa    MW: 28020.3 Da    PI: 5.8019
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000958.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.5e-08144191455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+++Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  XP_023000958.1 144 SHSIAERIRRGKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 191
                     8*************************9....35599999**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MAEFTANFQS LKPSPFPLMD IDPNQIPSLN FPDNIPVLFN DSFFGNQAAV PPRFPEIWGE  60
NFCQANQITA PVFEPTNPSG NDLHGSKKRR LQNEASESSS GNSTPQTKNN SGKGKRLKKG  120
DENDDEKPRE VVHVRAKRGQ ATDSHSIAER IRRGKINERL RCLQDIVPGC YKTMGMAVML  180
DEIINYVQSL QNQVEFLSMK LTAASSYYDF NSDSDTADRL KGKAMREGNG GLLVASTEDG  240
PFDMSFGSYS TAI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
187115KKRRLQNEASESSSGNSTPQTKNNSGKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.23e-60bHLH family protein