PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000912.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 329aa    MW: 36753.4 Da    PI: 4.3947
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000912.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.52.7e-19101154356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++++q++ Le+ Fe ++++  e++ +LAk lgL+ rqV +WFqNrRa++k
  XP_023000912.1 101 KKRRLSADQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWK 154
                     56689************************************************9 PP
2HD-ZIP_I/II130.85.2e-42100190191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     ekkrrls++qv++LE+sFe+e+kLeperKv+la++Lglqprqva+WFqnrRAR+ktkqlEkdyeaL+++y +lk + e+L ke+++L++e+
  XP_023000912.1 100 EKKRRLSADQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYEALQSSYGNLKVDYENLLKEKDSLKAEI 190
                     69**************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MAGRRVYGGG GDDGGSISGV SSNHSVLLQN RGGSFASEPL SALFLSGSSS STSPSLLGSR  60
SMMSFEDIRG GNGSNRSFFC PFDNEDNGDE DLDDYFHHPE KKRRLSADQV RFLEKSFETE  120
NKLEPERKVQ LAKDLGLQPR QVAIWFQNRR ARWKTKQLEK DYEALQSSYG NLKVDYENLL  180
KEKDSLKAEI LVLTDKLILK DKERSNSVVS EDDKFGEEPP QNLVDEASKS SKLGCKQEEM  240
SSVKSDIFDS DSPHYTDGVH SSLLDPGDSS YIFDPDQSDL SQDEEDNLGK NLLPPCIFPK  300
LEDVDYSDPP TSSCNFVFPI DDNALWSWS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149157RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.16e-45HD-ZIP family protein