PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000800.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 552aa MW: 62360.5 Da PI: 6.504

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.3	9.1e-16	41	119	12	97
HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++ + +p fa++ +++ +k+++led+ g++W+v++ +++ g+ +++GW+ F +++ L+ gDfv+F ++ + +++v+++ XP_023000800.1 41 SE-VVFFPPIFASTVsKLV---NKKVVLEDSLGQQWKVTV--SNCEGSLAFQEGWSAFSSEHSLEIGDFVIFNHIM--DLHFNVSIY 119 43.3778999998885444...568*************..*****************************775..454577776 PP
2	B3	41.3	2.7e-13	467	548	17	97
E--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 17 vlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 lp +f + ++e++k + l+d+s r W + + ++ vlt+GW+ F+ an++++gD ++F+++++ ++e++++++ XP_023000800.1 467 ELPMTFHLPCsrgRRNPENKKVVFLRDPSKRLWPILY--HEMPNVQVLTSGWEAFCCANRIESGDECLFHVKDELKREYNISIR 548 56666633334446667788899************..9****************************98888888998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MSSKVEACPE CTQRCLRFHR KTGNSSSVTS FFKVMFGDRF SEVVFFPPIF ASTVSKLVNK 60 KVVLEDSLGQ QWKVTVSNCE GSLAFQEGWS AFSSEHSLEI GDFVIFNHIM DLHFNVSIYT 120 KTGCEKVWFA EKSYTRKRIR STCPVLEITN EGLSNPQASS PSVGSGSNVT LSQDKFHVAG 180 YRNMNVYQGK RRKYQSNDEW HGPLNIVDDS YCLIDRNKDV GPEENRSPLF NLFSMEMQMV 240 NSCINENSTN KAAQDEINPN CASSSQNTII SVGPVNSVPV DIRGDTEVLP SNVSANKIND 300 KRQCFEEADI KMSVSGKDPC HDRTIEVPFI SSATNSDQKG EPFCDMPLKI IRDYQNVPAM 360 CNTVSTITRH DQGSSVKQEY PPNSLKVKKW DEKKIIKMEP LEIKTEVNNC GDITEQILEP 420 KVIKEEFLET SNQSGRENND TTDNADPIGT PAHISCVVAK DTLSFLELPM TFHLPCSRGR 480 RNPENKKVVF LRDPSKRLWP ILYHEMPNVQ VLTSGWEAFC CANRIESGDE CLFHVKDELK 540 REYNISIRKC KN

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MSSKVEACPE CTQRCLRFHR KTGNSSSVTS FFKVMFGDRF SEVVFFPPIF ASTVSKLVNK  60
KVVLEDSLGQ QWKVTVSNCE GSLAFQEGWS AFSSEHSLEI GDFVIFNHIM DLHFNVSIYT  120
KTGCEKVWFA EKSYTRKRIR STCPVLEITN EGLSNPQASS PSVGSGSNVT LSQDKFHVAG  180
YRNMNVYQGK RRKYQSNDEW HGPLNIVDDS YCLIDRNKDV GPEENRSPLF NLFSMEMQMV  240
NSCINENSTN KAAQDEINPN CASSSQNTII SVGPVNSVPV DIRGDTEVLP SNVSANKIND  300
KRQCFEEADI KMSVSGKDPC HDRTIEVPFI SSATNSDQKG EPFCDMPLKI IRDYQNVPAM  360
CNTVSTITRH DQGSSVKQEY PPNSLKVKKW DEKKIIKMEP LEIKTEVNNC GDITEQILEP  420
KVIKEEFLET SNQSGRENND TTDNADPIGT PAHISCVVAK DTLSFLELPM TFHLPCSRGR  480
RNPENKKVVF LRDPSKRLWP ILYHEMPNVQ VLTSGWEAFC CANRIESGDE CLFHVKDELK  540
REYNISIRKC KN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	5e-13	B3 family protein