PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000763.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 388aa MW: 44181.5 Da PI: 5.4623

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.9	7.9e-34	15	106	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d+++++++sws++ +sfvv+++ ef++ +Lpk+Fkhsnf+SF+RQLn+YgFkkv+ e+ weF+++ F +gk++l+++ XP_023000763.1 15 FLVKTYDMVDDPSTNSIVSWSSSDKSFVVWKPLEFSSVLLPKFFKHSNFSSFIRQLNTYGFKKVHPEQ---------WEFANDDFVRGKQHLMKN 100 9******************999************************************9998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_023000763.1 101 IHRRKP 106 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MDEAQGSGLT SLPPFLVKTY DMVDDPSTNS IVSWSSSDKS FVVWKPLEFS SVLLPKFFKH 60 SNFSSFIRQL NTYGFKKVHP EQWEFANDDF VRGKQHLMKN IHRRKPVHSH SLQNPHGQGV 120 SPPLTEVERK SFEDDIETLK RDKEQILLEL RKHEQEYQGV VLQMQNLKDR FQCVQQGMQL 180 FISLIARLLH KPGRRLDLLP QLETSDRKRR LPRVSYNNSE DNIEDNQMGT TQTISRENMD 240 CSFDPILKEE QFELVETSLT FWEGIVHSYG QTISPLDSSS NLELGGSVSH ASSPAVTCRQ 300 VSEELRCKSP GIDMNLEPMA TVAPESIASK DQAAGVKAPV PTGVNDVFWQ QFLTENPGSS 360 DPQEVQSARK DSDVIIEENR RSDQGNFW

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MDEAQGSGLT SLPPFLVKTY DMVDDPSTNS IVSWSSSDKS FVVWKPLEFS SVLLPKFFKH  60
SNFSSFIRQL NTYGFKKVHP EQWEFANDDF VRGKQHLMKN IHRRKPVHSH SLQNPHGQGV  120
SPPLTEVERK SFEDDIETLK RDKEQILLEL RKHEQEYQGV VLQMQNLKDR FQCVQQGMQL  180
FISLIARLLH KPGRRLDLLP QLETSDRKRR LPRVSYNNSE DNIEDNQMGT TQTISRENMD  240
CSFDPILKEE QFELVETSLT FWEGIVHSYG QTISPLDSSS NLELGGSVSH ASSPAVTCRQ  300
VSEELRCKSP GIDMNLEPMA TVAPESIASK DQAAGVKAPV PTGVNDVFWQ QFLTENPGSS  360
DPQEVQSARK DSDVIIEENR RSDQGNFW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	211	DRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	4e-98	HSF family protein