PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000636.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

LBD

Protein Properties

Length: 279aa MW: 31309.1 Da PI: 6.3928

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	126	1.9e-39	35	134	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkC++dC+lapyfp++++++f n+hklFG+sn++k++k+l++ ++e+am+++++++++r dPv G++++i++lq+q++ +kael+ XP_023000636.1 35 ACAACKYQRRKCVPDCILAPYFPHHRQRQFLNAHKLFGVSNITKIIKNLDPFQKEEAMRTIIFQSDVRSLDPVGGCYRIIRDLQRQIQYSKAELE 129 7*********************************************************************************************9 PP DUF260 96 llkee 100 ++ ++ XP_023000636.1 130 MVLHQ 134 98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MTSIHHHHHS PPHHHLSKST STVSSSSSST ATTQACAACK YQRRKCVPDC ILAPYFPHHR 60 QRQFLNAHKL FGVSNITKII KNLDPFQKEE AMRTIIFQSD VRSLDPVGGC YRIIRDLQRQ 120 IQYSKAELEM VLHQLAICKH QAAASVSAAA ILDADHPMSG GFSGIENQFV EEGFVIGENE 180 NAESLDDEAA EVWGIQASEI SPCSSLKSSI HDFDHINIHY HHQQFVKFHP DHHQFLHKSE 240 EAGMVEIDNV ILKEDSEPMQ NDGEVEGAVN NLFTFPTTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	4e-52	LBD family protein