PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000618.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 464aa MW: 49990.5 Da PI: 8.1929

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000618.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.3	2.1e-16	294	339	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L+ l+P++ K +Ka+iL +++eY+k+Lq XP_023000618.1 294 HNQSERKRRDKINQRLKTLQNLVPNS-----NKTNKASILDEVIEYLKQLQ 339 9**********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MSQCVPNWDL SASAAPPPFH ANSTPHDVVP TFEYEVAELT WENGQLAMHG LGFPRVTGKI 60 QYGGGGGGGG GCKNTWDNKP ARASGTLESL VNQGTCHGEI IGFNGHCGDG GTDLVPWFSD 120 HHRQTSLTPA AMDAMVPCEA GKAPAESSDI RVATRVENEK GRMIHEKQGR VMARVVHSST 180 EWSGCRNQMK VSGNAAKFGG ESGKKVTSDT RDSDFSVVRG GGGGLSVTTA RSQDSMNNTR 240 SGKICIKTAT VTATATDDRD SVCHSTHEVE EEDRHKENPK SSVSTKRSRA AAIHNQSERK 300 RRDKINQRLK TLQNLVPNSN KTNKASILDE VIEYLKQLQA QVQMMSKMSM PMMVPMALHQ 360 QLPLASLMSP MGMAGMGMGL GMDHLNMIAN RSALAAGMSP LLHPTAFMPT AAWDRGTADH 420 IQPLPTDPLS TFLACQSQPM AMEAYNRIAM MFQQHSSMAG ASKN

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MSQCVPNWDL SASAAPPPFH ANSTPHDVVP TFEYEVAELT WENGQLAMHG LGFPRVTGKI  60
QYGGGGGGGG GCKNTWDNKP ARASGTLESL VNQGTCHGEI IGFNGHCGDG GTDLVPWFSD  120
HHRQTSLTPA AMDAMVPCEA GKAPAESSDI RVATRVENEK GRMIHEKQGR VMARVVHSST  180
EWSGCRNQMK VSGNAAKFGG ESGKKVTSDT RDSDFSVVRG GGGGLSVTTA RSQDSMNNTR  240
SGKICIKTAT VTATATDDRD SVCHSTHEVE EEDRHKENPK SSVSTKRSRA AAIHNQSERK  300
RRDKINQRLK TLQNLVPNSN KTNKASILDE VIEYLKQLQA QVQMMSKMSM PMMVPMALHQ  360
QLPLASLMSP MGMAGMGMGL GMDHLNMIAN RSALAAGMSP LLHPTAFMPT AAWDRGTADH  420
IQPLPTDPLS TFLACQSQPM AMEAYNRIAM MFQQHSSMAG ASKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	298	303	ERKRRD
2	299	304	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-72	bHLH family protein