PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000326.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 721aa    MW: 80841.9 Da    PI: 6.2745
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000326.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.21.6e-1981136156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++++ ++t+eq++e+e++F+++++p++++r++L+++lgL  +q+k+WFqNrR++ k
  XP_023000326.1  81 KKRKNRHTSEQIREMEKVFKESPHPDEKQRQKLSENLGLHSKQIKFWFQNRRTQIK 136
                     567788**********************************************9876 PP
2START190.39.8e-602524712205
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS....SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv...dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                     +a +a +e+vk+a+++ep+W +s     e +n+de++++f+ ++     ++ea+r+sgvv+ +l++lv++++d+  qW+e+++    ka+t+ev+
  XP_023000326.1 252 IAMKAIEEVVKMADSGEPLWIRSFetgrELLNYDEYMKQFAGEHEqpeGEIEASRESGVVFVDLHRLVQSFMDVV-QWKEMFPsiisKASTIEVV 345
                     678999*****************9999999**********887778999**************************.******************* PP

                     CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS
           START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlk 173
                     ++g      ga+qlm+aelq+l+p+ p R+++f+R++++l+ ++wv++dvS+++  +   +ss+  ++++pSg++ie++sngh+kv+++eh++++
  XP_023000326.1 346 CNGdgstrnGAIQLMFAELQMLTPVFPpREVYFIRTCKRLSLEKWVVADVSINNVGDSI-DSSSSFCRKRPSGCIIEDTSNGHCKVIVLEHWECQ 439
                     *********************************************************87.66666678*************************** PP

                     SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 174 grlphwllrslvksglaegaktwvatlqrqce 205
                     +   + +++ +v+sgl++ga++w+at+q +ce
  XP_023000326.1 440 KTKLRTMYQTMVNSGLIFGARHWMATMQTHCE 471
                     *******************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    
MAVVMSDNRP SRRVMNVPSS PALSLTLAGV FQNAVDMGAD APVRREDSCS DNSEPAGSRS  60
AEDLGAEPDD EDEDKLLGNR KKRKNRHTSE QIREMEKVFK ESPHPDEKQR QKLSENLGLH  120
SKQIKFWFQN RRTQIKVSLE RQEMEKLREE NQALKEMINK SSCLKCCSSA NSIAISMDSM  180
FTSSDQKQQQ LVTEIVRLKA EVEGLRTALE QYAPAGTSRS RSGENEDAIE GRRNLEKSKR  240
IFGLEKARVM EIAMKAIEEV VKMADSGEPL WIRSFETGRE LLNYDEYMKQ FAGEHEQPEG  300
EIEASRESGV VFVDLHRLVQ SFMDVVQWKE MFPSIISKAS TIEVVCNGDG STRNGAIQLM  360
FAELQMLTPV FPPREVYFIR TCKRLSLEKW VVADVSINNV GDSIDSSSSF CRKRPSGCII  420
EDTSNGHCKV IVLEHWECQK TKLRTMYQTM VNSGLIFGAR HWMATMQTHC EWQVFYMATN  480
VPMKDSTGIT TLGGRKSVLR LAQRMTSSIY QAMGASSSHT WTKVQSKIGE IIRVASRKNL  540
NDPREPLGLI LCAVASVWLP ISPKLLFEFL INGSRRIEWD GMLSGPVETL AVFAKGQNRG  600
NAVTIQAIKS DEPNKWIIQD SLTNDYESSV IYAQIDITSM QSVMAGCDPS TITTLPMGFS  660
ILPDGHPPRA SVISKSKEER VTEGGSLLTI ATQTSQSAEY VNDFISHTLE NIKASLQVED  720
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein