PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000104.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 448aa MW: 48881.3 Da PI: 8.925

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	71	93	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_023000104.1 71 FVCEICNKGFQRDQNLQLHRRGH 93 89*******************88 PP
2	zf-C2H2	11.4	0.00098	148	170	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_023000104.1 148 WKCDKCSKKYAVQSDWKAHSKIC 170 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MMKGSFLSQQ QQQLLMDQTL SNLTSPSSPN NQTQFFSPPP PKRKRNLAGN PDPDAEVIAL 60 SPKTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLK QRSNKEVIKK KVYVCPEPSC 120 VHHDPLRALG DLTGIKKHFC RKHGEKKWKC DKCSKKYAVQ SDWKAHSKIC GTKEYKCDCG 180 TLFSRRDSFI THRAFCDALA DESARSAMEL SPLISNYNNL QELLFKRGFG GGDSSNNDDN 240 NLKTEIPSWL QPDEIFVGST HQTLNPNPSG LVPPCVSSPH ISATALLQKA AQMGATMSSP 300 LMGRTHEVVH VSTGNYGEMG IRSREGGMGV SCSSISCCTD YGNKAAAVSA AVTATATPSG 360 PTTFLHDMIN SLASASHPFH QDSSAFNAAA IAAMHHHTAA GRSDGLTRDF LGLRSLSHGD 420 ILSITGFGNC IVPNSATLQS QTQKPWQG

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MMKGSFLSQQ QQQLLMDQTL SNLTSPSSPN NQTQFFSPPP PKRKRNLAGN PDPDAEVIAL  60
SPKTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLK QRSNKEVIKK KVYVCPEPSC  120
VHHDPLRALG DLTGIKKHFC RKHGEKKWKC DKCSKKYAVQ SDWKAHSKIC GTKEYKCDCG  180
TLFSRRDSFI THRAFCDALA DESARSAMEL SPLISNYNNL QELLFKRGFG GGDSSNNDDN  240
NLKTEIPSWL QPDEIFVGST HQTLNPNPSG LVPPCVSSPH ISATALLQKA AQMGATMSSP  300
LMGRTHEVVH VSTGNYGEMG IRSREGGMGV SCSSISCCTD YGNKAAAVSA AVTATATPSG  360
PTTFLHDMIN SLASASHPFH QDSSAFNAAA IAAMHHHTAA GRSDGLTRDF LGLRSLSHGD  420
ILSITGFGNC IVPNSATLQS QTQKPWQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-105	C2H2 family protein