PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999983.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 602aa MW: 66486.7 Da PI: 5.6609

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.7	2.2e-07	485	533	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v G g+W+ I + Rt ++k++w+++l XP_022999983.1 485 AWTLVEVIKLVEGVSICGAGRWSEIKKLSFssySYRTSVDLKDKWRNLL 533 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MGTVVGFVEN EGKIVDSGIL QDVSTLSPNQ IADPVVYKLV RVDGDGRFVP ATDDEVMEVE 60 DLLEDDKSEK VEDAGQILEC VPTEGTLFGK PRVKISNGLP QSEGDAGYTA RLEYIEEVLQ 120 KVKREERLRL ACGSLNYPSA YVDGDRKGSD QHGRLPVTDE KFQSQISLQE ISHCSPSLNE 180 NHENEHGSLG NFLKHPDKSV ESESSDAICT TSKPDFSMLK GDICLDNLSI RELHECFKAT 240 FGRDTTVKDK SWLKRRIAMG LTNSCDIPAS SFIIKEGKFI EESSQNVVGV STIPTAEALN 300 IECSGSPTTY CLETKDHHHI EEIELDHGIE DQHEERAAVK RIRKPTRRYI EELSEVESRE 360 YVPKVISLNK SSVSDGVSAN SIERPSKKVC SDRGRTVITR LDSLGGSGVQ VPCVSRVRRS 420 RPRKDIVALV FTLPDKDQNP SVKDTNEVEE KNLEEKPTDS GNASDDNAII VPTPKSGSRR 480 KHHRAWTLVE VIKLVEGVSI CGAGRWSEIK KLSFSSYSYR TSVDLKDKWR NLLKASFAQT 540 PVGEGMSSRK HVSVSIPEQI LLQVRELAEM HAQIPPSNHG QGKLGGVSSG SNMHEISPAV 600 CL

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MGTVVGFVEN EGKIVDSGIL QDVSTLSPNQ IADPVVYKLV RVDGDGRFVP ATDDEVMEVE  60
DLLEDDKSEK VEDAGQILEC VPTEGTLFGK PRVKISNGLP QSEGDAGYTA RLEYIEEVLQ  120
KVKREERLRL ACGSLNYPSA YVDGDRKGSD QHGRLPVTDE KFQSQISLQE ISHCSPSLNE  180
NHENEHGSLG NFLKHPDKSV ESESSDAICT TSKPDFSMLK GDICLDNLSI RELHECFKAT  240
FGRDTTVKDK SWLKRRIAMG LTNSCDIPAS SFIIKEGKFI EESSQNVVGV STIPTAEALN  300
IECSGSPTTY CLETKDHHHI EEIELDHGIE DQHEERAAVK RIRKPTRRYI EELSEVESRE  360
YVPKVISLNK SSVSDGVSAN SIERPSKKVC SDRGRTVITR LDSLGGSGVQ VPCVSRVRRS  420
RPRKDIVALV FTLPDKDQNP SVKDTNEVEE KNLEEKPTDS GNASDDNAII VPTPKSGSRR  480
KHHRAWTLVE VIKLVEGVSI CGAGRWSEIK KLSFSSYSYR TSVDLKDKWR NLLKASFAQT  540
PVGEGMSSRK HVSVSIPEQI LLQVRELAEM HAQIPPSNHG QGKLGGVSSG SNMHEISPAV  600
CL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	418	424	RRSRPRK
2	418	425	RRSRPRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-104	MYB_related family protein