PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022999517.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 292aa    MW: 33305.6 Da    PI: 5.7471
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022999517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1118.6e-35141062103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F++k+y++++d+ +++li ws+ +nsf+v d+ e+++++Lp+yFkh+nf+SFvRQLn+YgFkkv+ ++         weF+ ++F +++k+ll++
  XP_022999517.1  14 FVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFSSFVRQLNTYGFKKVDPDK---------WEFASQWFLRDQKHLLKN 99 
                     9****************************************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i r++++
  XP_022999517.1 100 ISRRRHS 106
                     ***9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MESNHQQNDT VAPFVMKTYQ MVNDPITDDL IAWSKANNSF IVADPLELSR RILPSYFKHN  60
NFSSFVRQLN TYGFKKVDPD KWEFASQWFL RDQKHLLKNI SRRRHSRNLH FQVKREDDGE  120
LAMEISKLKE EQIALETEVE SMNKRIEATE KRPQQMMSFL YKIMENPEIL QRILLQNRRV  180
RRRVTMRPPP SPVKFVKAME DDSSPETGVF DDNVALSPET TLWWNGGSAV ASSLTSDSGG  240
GFGDYIELSP PESNISVYEL GDGRESVLAE MVAGGGSSSP PPYPFSLFSG GF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.14e-80HSF family protein