PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999424.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 418aa MW: 44055.4 Da PI: 6.5099

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.5e-11	225	270	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022999424.1 225 HSIAERLRRERIAERMKGLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 270 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MRLTNSLPDL HSHRRNQPPE TDDSQLHHHL QTSLFHPPSF SSDDFLDQIL STAPPPWELP 60 VGLPNPHSNL PPQPPPPSNP DNGAFQIGDA TPAGKMAMAL LQQQLLMSRG IATVSDVSSL 120 LPMLSNDVVE VEGSSSFKCP NPINHGSVIP SIFNEFTGFL NASGSSQNQN QFQAGNSNSQ 180 KQNFIAPVSI NPPPPSVPGS GGGAATSAQP RQRVRARRGQ ATDPHSIAER LRRERIAERM 240 KGLQELVPNA NKTDKASMLD EIIDYVKFLQ LQVKVLSVSR LGGATAAMPS LLPDSSTQGG 300 TDCNLSNETG GAVGQTSAGA PTSNDAMAIT ENQVVKLMEE DMGSAMQYLQ GKGLCLMPIS 360 LATAISAATC HSRPITTSKG GGDAPTSPSL SALTSQSTVL GNGTVDRAVR DSASVSRP

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MRLTNSLPDL HSHRRNQPPE TDDSQLHHHL QTSLFHPPSF SSDDFLDQIL STAPPPWELP  60
VGLPNPHSNL PPQPPPPSNP DNGAFQIGDA TPAGKMAMAL LQQQLLMSRG IATVSDVSSL  120
LPMLSNDVVE VEGSSSFKCP NPINHGSVIP SIFNEFTGFL NASGSSQNQN QFQAGNSNSQ  180
KQNFIAPVSI NPPPPSVPGS GGGAATSAQP RQRVRARRGQ ATDPHSIAER LRRERIAERM  240
KGLQELVPNA NKTDKASMLD EIIDYVKFLQ LQVKVLSVSR LGGATAAMPS LLPDSSTQGG  300
TDCNLSNETG GAVGQTSAGA PTSNDAMAIT ENQVVKLMEE DMGSAMQYLQ GKGLCLMPIS  360
LATAISAATC HSRPITTSKG GGDAPTSPSL SALTSQSTVL GNGTVDRAVR DSASVSRP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	235	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-67	bHLH family protein