PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998936.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 325aa MW: 35854.7 Da PI: 5.2858

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.3	5.7e-18	36	85	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f+ Lr+l+P++ ++K +Ka+ L +++eYI+ Lq XP_022998936.1 36 RSKHSETEQRRRSKINERFQILRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 85 899***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MKTSKSVQER FEDDGNGELG VKIEGKSGDS KASDHRSKHS ETEQRRRSKI NERFQILRDL 60 IPQNDQKRDK ASFLLEVIEY IQFLQEKLNL YEGSCQGWSP EPSKLMPWKN YRASENYVDH 120 SQVIKSGSSR ENAVFSQPML TNASNVMDAD LGPAAVLNAV DHALVSASQE LPMSMRAQPV 180 VFDSVGRGSL STETLDEPAS GSENISSKTQ TESFQGRTST STGFPDHAVC DREDLTMESE 240 LESISGAYSH GLLNTLTQAL QASGVDLSQT NISVKVDVGK RANRAMSMSE DDKKQSMNNQ 300 VVAESLHGCF SENTEQAHKK LRTGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-56	bHLH family protein