PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998643.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CO-like

Protein Properties

Length: 323aa MW: 34924 Da PI: 4.8297

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	29.7	1.3e-09	22	66	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +C+ +e+ ++ + C+ + lC+ C e+H+ H +vp+ XP_022998643.1 22 VICEACERSPAVFICKADAASLCAACDAEIHSAnplarrHHRVPI 66 68*****************************66899999877775 PP
2	CCT	70.7	3.7e-24	254	297	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++ XP_022998643.1 254 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 297 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MLKTEDDYFG GAAATATATA GVICEACERS PAVFICKADA ASLCAACDAE IHSANPLARR 60 HHRVPIGGAN MVGTTPECQE DEDEDEAASW LLLNPLKTNN ENRGGGSIQS NNNTNGLFLL 120 GGEDDYLNFV EFNGCGEDQF EGSENYGSGR CGGEDRVVPI EFEGKDPMLE QSYGGVDGSY 180 SYNGFLTHAV TSLPTSLLPS SMEVGVVPDS ATTMSDISVF SNIRPPKGTI DLFSGAADVA 240 AVQIPATQLS PMDREARVLR YREKKKTRKF EKTIRYASRK AYAETRPRIK GRFAKRTDVE 300 VKLDRKFSSP LMANVGYGIV PSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	6e-55	CO-like family protein