PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022998629.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 277aa    MW: 30806.6 Da    PI: 8.5596
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022998629.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.56.5e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed++lvd+++++G g+W+t ++  g+ R++k+c++rw +yl
   XP_022998629.1 14 KGAWTKDEDQRLVDYIRLHGEGCWRTLPKAAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding58.41.6e-1867111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T eEdel+v+++ +lG++ W+ Ia +++ gRt++++k++w+++
   XP_022998629.1  67 RGNFTDEEDELIVKLHSLLGNK-WSVIAGRLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MGRSPCCEKA HTNKGAWTKD EDQRLVDYIR LHGEGCWRTL PKAAGLLRCG KSCRLRWINY  60
LRPDLKRGNF TDEEDELIVK LHSLLGNKWS VIAGRLPGRT DNEIKNYWNT HIKRKLISRG  120
IDPQTHRPLN ESAAVSTRFG YLNHEYPNTN TNNSSSSSSV PVAELPIMKP TIINAPSLDI  180
DEEGSGTTTE TEPAATHVKT EVNLELSIGL HPFQGETARG SPRSSAESRL RERSPYQFGS  240
LCLCCQLGSD NGGECRRNCQ NSKGWLFGVR PSALGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09460.17e-91MYB family protein