PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022998611.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 759aa    MW: 84941 Da    PI: 6.6363
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022998611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.71.5e-21100155156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL+ rqVk+WFqNrR++ k
  XP_022998611.1 100 RKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIK 155
                     7999************************************************9877 PP
2START203.58.9e-642744955206
                     HHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
           START   5 eaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                     +a++el ++a+ +ep+W +s     e++n+de+l++f  +++      +++ea+r+++vv+m++ +l ++++d + qW+e+++    ka+t++vi
  XP_022998611.1 274 QALEELKTMAATNEPLWIRSIetgrEILNYDEYLKTFHLKNSntcwlkRHIEASRDTTVVFMEPSRLIQSFMDEN-QWKEMFPsmisKAATIDVI 367
                     6789999******************************8877799*******************************.******************* PP

                     CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS
           START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlk 173
                     ++g      ga+qlm+ e q+l+plvp R+ +f+R+++ql  ++w+ivdvS+d+ ++ + ++s+++ +++pSg++i+++sngh+kvt+veh +++
  XP_022998611.1 368 CNGevanwnGAVQLMFVEVQLLTPLVPtREIYFIRHCKQLDTEQWAIVDVSIDNVDDINIDASLMKYRKRPSGCIIKDESNGHCKVTMVEHLECE 462
                     **********************************************************99*********************************** PP

                     SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 174 grlphwllrslvksglaegaktwvatlqrqcek 206
                     + ++h+l+r +v++g+a+ga++w+atlq qce+
  XP_022998611.1 463 KTQVHNLYRTIVNNGTAFGARHWMATLQLQCER 495
                     *******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 759 aa     Download sequence    
MLADMSNNNN RLAFTKDFFS SPALSLTLAG IFRRGEMAEK GDVEMEEVDD GSGEVRRDDA  60
AEVSSENLGP VRSRSDDDFE GGGVHEENEE GDGGCLVKRR KKYHRHTTEQ IREMEALFKE  120
SPHPDEKQRQ QLSKRLGLSP RQVKFWFQNR RTQIKAIQER HENTLLKAEM EKLREENKAM  180
RELTKKKVGC PNCGTANAAE DHTAFTTTEQ LRIKNAKLKA EVEKLRAALG KHSQSSISPS  240
YSSGNDQETN RNCLDFYTGI FGLEKSRIME RVHQALEELK TMAATNEPLW IRSIETGREI  300
LNYDEYLKTF HLKNSNTCWL KRHIEASRDT TVVFMEPSRL IQSFMDENQW KEMFPSMISK  360
AATIDVICNG EVANWNGAVQ LMFVEVQLLT PLVPTREIYF IRHCKQLDTE QWAIVDVSID  420
NVDDINIDAS LMKYRKRPSG CIIKDESNGH CKVTMVEHLE CEKTQVHNLY RTIVNNGTAF  480
GARHWMATLQ LQCERLAFFM ATNIPIKDST GVATLAGRKS TLKLAQRMSS SFSQAVAASS  540
YQTWTKVVGK TGEDIRVCSR KNLSDPGEPI GVILCAVFSL WLPVPPHTLF HFLRDDARRN  600
EWDAMFGGDK VDSIANLAKG QDRGNSTRGS KESSSSSMWI LQDTSTNSSE SMVVYSGVDV  660
SGMQSVMTGC DSGSLTILPS GFSILPDGAE SRSLLITRQK DHKSSDTHGG ALLTAAVQIV  720
TDASPSAKPT VDSVEYVKSI VCCTIKNIRS SLGCCEDDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein