PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998391.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 1011aa MW: 111513 Da PI: 6.1573

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.7	2.6e-41	154	231	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hsk +++lv++++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_022998391.1 154 VCQVEDCGADLSNAKDYHRRHKVCEMHSKVSNALVANVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKNNP 231 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1011 aa Download sequence
METGYGGEAC QLYGMGSMDL RAAVGKKSLE WDLNDWKWDG DLFIARPLNL VESDHLGSQV 60 FPIVSGIPLT GGSSNSSSSC SDEANMGIEK GKREVEKRRR DNVMEDENLN DEARSLSLKV 120 GGNGCQIVEK EAGNWEGSSG KKTKLTGGNS SRAVCQVEDC GADLSNAKDY HRRHKVCEMH 180 SKVSNALVAN VMQRFCQQCS RFHVLQEFDE GKRSCRRRLA GHNKRRRKNN PDNVVNGNSP 240 PDEQTSSYLL LTLMRILANL HSNGSNKTTD QDLLSNLIRI LACQSGEHGG RNRSGILHEP 300 QNLLNGAKSD LVCTFLSTGP QVPLRSSKQP DTIPISETPV QATVRGGDTP AISSVKPSTS 360 NSLPAYSEIR DNTVGQCKMM NFDLNDVYVD SDDGMEDIER QAHPVVHMGT SSLECPSWVQ 420 QDSHQSSPPQ TSGNSDSASA QSPSSSAGEA QSRTDRIILK LFGKAPNDFP HVLRAQVLNW 480 LSHSPTEIES YIRPGCVVLT IYLRQTEAEW NDLCHDLSTS LNRLLDVSDK AFWRTGWVYV 540 RVQHQIAFVY HGQVVVDTSL PLRNKNYCRI TSVNPVAVPL SKKAIFSVKG INLTRSTTRL 600 LCAIEGTYLT QEASDDSTES DDNSNAQDDS QCVTFSCSIP VVYGRGFIEA EDDGLSSSSF 660 PFIVAEEDVC TEICTLQSAL EFTETCSNSG ETAELEGRSN AMEFIHEIGW LFHRNHLKSR 720 LAHLDPNENL FSLSRFQWLV EFSMDHEWCA VVKKLLDVLL DGTVDFGDHP SLNLALTEMS 780 LLHRAVRKNS RSLVELLLGY PSKVKDSSSS EDNASIDGST GSFLFRPDVV GLAGLTPLHI 840 AAGKDDSMDV LDALTNDPGM VGVEAWKSAR DVTGSTPEDY ARLRGHYSYI RLVQRKINKR 900 SSAGHVVLDI PSTLSDGSWN QKQNTDVMTS SRFEIGRTKL KHSQQDCSRC VMKPSGFGML 960 SKASLVYRPA MLSMVAIAAV CVCVALLFKS SPEVLYVFRP FRWELLEYGT S

Sequence ? help Back to Top

Protein Sequence Length: 1011 aa Download sequence

METGYGGEAC QLYGMGSMDL RAAVGKKSLE WDLNDWKWDG DLFIARPLNL VESDHLGSQV  60
FPIVSGIPLT GGSSNSSSSC SDEANMGIEK GKREVEKRRR DNVMEDENLN DEARSLSLKV  120
GGNGCQIVEK EAGNWEGSSG KKTKLTGGNS SRAVCQVEDC GADLSNAKDY HRRHKVCEMH  180
SKVSNALVAN VMQRFCQQCS RFHVLQEFDE GKRSCRRRLA GHNKRRRKNN PDNVVNGNSP  240
PDEQTSSYLL LTLMRILANL HSNGSNKTTD QDLLSNLIRI LACQSGEHGG RNRSGILHEP  300
QNLLNGAKSD LVCTFLSTGP QVPLRSSKQP DTIPISETPV QATVRGGDTP AISSVKPSTS  360
NSLPAYSEIR DNTVGQCKMM NFDLNDVYVD SDDGMEDIER QAHPVVHMGT SSLECPSWVQ  420
QDSHQSSPPQ TSGNSDSASA QSPSSSAGEA QSRTDRIILK LFGKAPNDFP HVLRAQVLNW  480
LSHSPTEIES YIRPGCVVLT IYLRQTEAEW NDLCHDLSTS LNRLLDVSDK AFWRTGWVYV  540
RVQHQIAFVY HGQVVVDTSL PLRNKNYCRI TSVNPVAVPL SKKAIFSVKG INLTRSTTRL  600
LCAIEGTYLT QEASDDSTES DDNSNAQDDS QCVTFSCSIP VVYGRGFIEA EDDGLSSSSF  660
PFIVAEEDVC TEICTLQSAL EFTETCSNSG ETAELEGRSN AMEFIHEIGW LFHRNHLKSR  720
LAHLDPNENL FSLSRFQWLV EFSMDHEWCA VVKKLLDVLL DGTVDFGDHP SLNLALTEMS  780
LLHRAVRKNS RSLVELLLGY PSKVKDSSSS EDNASIDGST GSFLFRPDVV GLAGLTPLHI  840
AAGKDDSMDV LDALTNDPGM VGVEAWKSAR DVTGSTPEDY ARLRGHYSYI RLVQRKINKR  900
SSAGHVVLDI PSTLSDGSWN QKQNTDVMTS SRFEIGRTKL KHSQQDCSRC VMKPSGFGML  960
SKASLVYRPA MLSMVAIAAV CVCVALLFKS SPEVLYVFRP FRWELLEYGT S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein