PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998112.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 463aa MW: 51600.9 Da PI: 8.3342

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.3e-17	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+ XP_022998112.1 59 REKWTEEEHQRFLEALKLYGRG-WRQIKEHVG-TKTAVQIRSHAQKF 103 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MAVQEKNEGP LSNSSIGANN CLSSDGTQLD PLMIVSSLCS YGNESSLKVR KPYTISKQRE 60 KWTEEEHQRF LEALKLYGRG WRQIKEHVGT KTAVQIRSHA QKFFSKVVRE PSGSNDSSIN 120 PIEIPPPRPK RKPLHPYPRK AVDSLKAISV AREPERSPSP NLSIAEKETQ SPTSVLTAFS 180 SDDQISTVSE QHNRCSSPIS QAVDIQSTRF PSVRKGEMLL LESSSERFPE DFLTLKSKPG 240 SASKKLDNKL HSPVKSIKLF GRTVMVTDDK KPSLHDIEVT KSLVLDGESK NECGVYAEKP 300 VQMLPSKHMD VNLSLRMDNN GDWNMSPGGA PTNNTALNQE NSVRYVEAIS NAPQTCWSLY 360 RSVPYYYLAP PDQTNQVMEE RVQNDSSVES SCVDSCSGSS SKDKNENQSP EFECQDPCLV 420 GRGNRNESKK GFVPYKRCLA QRDASSSLIV SEEREGRRVR VCL

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MAVQEKNEGP LSNSSIGANN CLSSDGTQLD PLMIVSSLCS YGNESSLKVR KPYTISKQRE  60
KWTEEEHQRF LEALKLYGRG WRQIKEHVGT KTAVQIRSHA QKFFSKVVRE PSGSNDSSIN  120
PIEIPPPRPK RKPLHPYPRK AVDSLKAISV AREPERSPSP NLSIAEKETQ SPTSVLTAFS  180
SDDQISTVSE QHNRCSSPIS QAVDIQSTRF PSVRKGEMLL LESSSERFPE DFLTLKSKPG  240
SASKKLDNKL HSPVKSIKLF GRTVMVTDDK KPSLHDIEVT KSLVLDGESK NECGVYAEKP  300
VQMLPSKHMD VNLSLRMDNN GDWNMSPGGA PTNNTALNQE NSVRYVEAIS NAPQTCWSLY  360
RSVPYYYLAP PDQTNQVMEE RVQNDSSVES SCVDSCSGSS SKDKNENQSP EFECQDPCLV  420
GRGNRNESKK GFVPYKRCLA QRDASSSLIV SEEREGRRVR VCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	1e-49	MYB_related family protein