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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022997681.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 663aa MW: 73953.2 Da PI: 8.7835 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.3 | 1.5e-07 | 565 | 614 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_022997681.1 565 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 614 6789999*******************9988889**************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 663 aa Download sequence |
MVLQKRLDYG FHDYQVPTMP RATRSARKRS ICKKGTESSQ MRAFDLLATV ADKLLHGTEG 60 PTTNTIDTST EKDRYTVVDK ELNVDSLCKV EPSQGFVAEL VLSGHDNKCD SKDCFPQHNE 120 HVEHSLPLAS EVTNFDKNNN EMGNLASEVR VGSPSSKESD NCELDGKNEV IVKYELHKTE 180 EVLTRTQDRG DDSCKREDPI IWDQKACVLG NSVSCGKMTH NKQIVQNSYF ATQNNVKVVD 240 RDDDENSSGC THPVSSIKSF RTVPSSRDRR IKKVSASKSW KVVPRYRDES LSKTDGVWKS 300 MSCCKSSHDS CRPQKSQMNI PFKKRKFFDC SSSVSNSDGG INSEGVSDSN GKVAKTDSSG 360 HGHHKSFQSK DSHVKIRIKS FRVPELFIEI AETATVGSLK RTVMEAVTAI LGGGLRVGVL 420 LQGKKVRDDN KTLFQTGISH DNQLDSLGFA LEPNPSRTPL VLCQEDSPCI LPCDAPEPLT 480 RYSPDVSADH PSSSNVLPEP HGNSLGNFIE SDHDSAPSPT DTSNHKSTVD SKALVTVPAM 540 TAEAISVVPM HRKSKRSEVA QRRIRRPFSV AEVEALVQAV EKLGTGRWRD VKLRAFDNAK 600 HRTYVDLKDK WKTLVHTARI SPRQRRGEPV PQELLDRVLT AHAYWSKQQA KYQLKRQPER 660 FVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07540.1 | 1e-129 | MYB_related family protein |