PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022997681.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 663aa    MW: 73953.2 Da    PI: 8.7835
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022997681.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.31.5e-07565614147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      r +++  E e lv+av++lG+g+W+ +  +     k+Rt  ++k++w ++
   XP_022997681.1 565 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 614
                      6789999*******************9988889**************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 663 aa     Download sequence    
MVLQKRLDYG FHDYQVPTMP RATRSARKRS ICKKGTESSQ MRAFDLLATV ADKLLHGTEG  60
PTTNTIDTST EKDRYTVVDK ELNVDSLCKV EPSQGFVAEL VLSGHDNKCD SKDCFPQHNE  120
HVEHSLPLAS EVTNFDKNNN EMGNLASEVR VGSPSSKESD NCELDGKNEV IVKYELHKTE  180
EVLTRTQDRG DDSCKREDPI IWDQKACVLG NSVSCGKMTH NKQIVQNSYF ATQNNVKVVD  240
RDDDENSSGC THPVSSIKSF RTVPSSRDRR IKKVSASKSW KVVPRYRDES LSKTDGVWKS  300
MSCCKSSHDS CRPQKSQMNI PFKKRKFFDC SSSVSNSDGG INSEGVSDSN GKVAKTDSSG  360
HGHHKSFQSK DSHVKIRIKS FRVPELFIEI AETATVGSLK RTVMEAVTAI LGGGLRVGVL  420
LQGKKVRDDN KTLFQTGISH DNQLDSLGFA LEPNPSRTPL VLCQEDSPCI LPCDAPEPLT  480
RYSPDVSADH PSSSNVLPEP HGNSLGNFIE SDHDSAPSPT DTSNHKSTVD SKALVTVPAM  540
TAEAISVVPM HRKSKRSEVA QRRIRRPFSV AEVEALVQAV EKLGTGRWRD VKLRAFDNAK  600
HRTYVDLKDK WKTLVHTARI SPRQRRGEPV PQELLDRVLT AHAYWSKQQA KYQLKRQPER  660
FVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.11e-129MYB_related family protein