PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997681.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 663aa MW: 73953.2 Da PI: 8.7835

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.3	1.5e-07	565	614	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_022997681.1 565 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 614 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MVLQKRLDYG FHDYQVPTMP RATRSARKRS ICKKGTESSQ MRAFDLLATV ADKLLHGTEG 60 PTTNTIDTST EKDRYTVVDK ELNVDSLCKV EPSQGFVAEL VLSGHDNKCD SKDCFPQHNE 120 HVEHSLPLAS EVTNFDKNNN EMGNLASEVR VGSPSSKESD NCELDGKNEV IVKYELHKTE 180 EVLTRTQDRG DDSCKREDPI IWDQKACVLG NSVSCGKMTH NKQIVQNSYF ATQNNVKVVD 240 RDDDENSSGC THPVSSIKSF RTVPSSRDRR IKKVSASKSW KVVPRYRDES LSKTDGVWKS 300 MSCCKSSHDS CRPQKSQMNI PFKKRKFFDC SSSVSNSDGG INSEGVSDSN GKVAKTDSSG 360 HGHHKSFQSK DSHVKIRIKS FRVPELFIEI AETATVGSLK RTVMEAVTAI LGGGLRVGVL 420 LQGKKVRDDN KTLFQTGISH DNQLDSLGFA LEPNPSRTPL VLCQEDSPCI LPCDAPEPLT 480 RYSPDVSADH PSSSNVLPEP HGNSLGNFIE SDHDSAPSPT DTSNHKSTVD SKALVTVPAM 540 TAEAISVVPM HRKSKRSEVA QRRIRRPFSV AEVEALVQAV EKLGTGRWRD VKLRAFDNAK 600 HRTYVDLKDK WKTLVHTARI SPRQRRGEPV PQELLDRVLT AHAYWSKQQA KYQLKRQPER 660 FVL

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MVLQKRLDYG FHDYQVPTMP RATRSARKRS ICKKGTESSQ MRAFDLLATV ADKLLHGTEG  60
PTTNTIDTST EKDRYTVVDK ELNVDSLCKV EPSQGFVAEL VLSGHDNKCD SKDCFPQHNE  120
HVEHSLPLAS EVTNFDKNNN EMGNLASEVR VGSPSSKESD NCELDGKNEV IVKYELHKTE  180
EVLTRTQDRG DDSCKREDPI IWDQKACVLG NSVSCGKMTH NKQIVQNSYF ATQNNVKVVD  240
RDDDENSSGC THPVSSIKSF RTVPSSRDRR IKKVSASKSW KVVPRYRDES LSKTDGVWKS  300
MSCCKSSHDS CRPQKSQMNI PFKKRKFFDC SSSVSNSDGG INSEGVSDSN GKVAKTDSSG  360
HGHHKSFQSK DSHVKIRIKS FRVPELFIEI AETATVGSLK RTVMEAVTAI LGGGLRVGVL  420
LQGKKVRDDN KTLFQTGISH DNQLDSLGFA LEPNPSRTPL VLCQEDSPCI LPCDAPEPLT  480
RYSPDVSADH PSSSNVLPEP HGNSLGNFIE SDHDSAPSPT DTSNHKSTVD SKALVTVPAM  540
TAEAISVVPM HRKSKRSEVA QRRIRRPFSV AEVEALVQAV EKLGTGRWRD VKLRAFDNAK  600
HRTYVDLKDK WKTLVHTARI SPRQRRGEPV PQELLDRVLT AHAYWSKQQA KYQLKRQPER  660
FVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-129	MYB_related family protein