PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997680.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 670aa MW: 74629.9 Da PI: 8.8125

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.3	1.5e-07	572	621	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_022997680.1 572 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 621 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MVLQKRLDYG FHDYQVPTMP RATRSARKRS ICKKGTESSQ MRAFDLLATV ADKLLHGTEG 60 PTTNTIDTST EKDRYTVVDK ELNVDSLCKV EPSQGFVAEL VLSGHDNKCD SKDCFPQHNE 120 HVEHSLPLAS EVTNFDKNNN EMGNLASEVR VGSPSSKESD NCELDGKNEV IVKYELHKTE 180 EVLTRTQDRG DDSCKREDPI IWDQKACVLG NSVSCGKMTH NKQIVQNSYF ATQNNVKVVD 240 RDDDENSSGC THPVSSIKSF RTVPSSRDRR IKKVSASKSW KVVPRYRDES LSKTDGVWKS 300 MSCCKSSHDS CRPQKSQMNI PFKKRKFFDC SSSVSNSDGG INSEGVSDSN GKVAKTDSSG 360 RSCSVSGHGH HKSFQSKDSH VKIRIKSFRV PELFIEIAET ATVGSLKRTV MEAVTAILGG 420 GLRVGVLLQG KKVRDDNKTL FQTGISHDNQ LDSLGFALEP NPSRTPLVLC QEDSPCILPC 480 DAPEPLTRYS PDVSADHPSS SNVLPEPHGN SLGNFIESDH DSAPSPTDTS NHKSTVDSKA 540 LVTVPAMTAE AISVVPMHRK SKRSEVAQRR IRRPFSVAEV EALVQAVEKL GTGRWRDVKL 600 RAFDNAKHRT YVDLKDKWKT LVHTARISPR QRRGEPVPQE LLDRVLTAHA YWSKQQAKYQ 660 LKRQPERFVL

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MVLQKRLDYG FHDYQVPTMP RATRSARKRS ICKKGTESSQ MRAFDLLATV ADKLLHGTEG  60
PTTNTIDTST EKDRYTVVDK ELNVDSLCKV EPSQGFVAEL VLSGHDNKCD SKDCFPQHNE  120
HVEHSLPLAS EVTNFDKNNN EMGNLASEVR VGSPSSKESD NCELDGKNEV IVKYELHKTE  180
EVLTRTQDRG DDSCKREDPI IWDQKACVLG NSVSCGKMTH NKQIVQNSYF ATQNNVKVVD  240
RDDDENSSGC THPVSSIKSF RTVPSSRDRR IKKVSASKSW KVVPRYRDES LSKTDGVWKS  300
MSCCKSSHDS CRPQKSQMNI PFKKRKFFDC SSSVSNSDGG INSEGVSDSN GKVAKTDSSG  360
RSCSVSGHGH HKSFQSKDSH VKIRIKSFRV PELFIEIAET ATVGSLKRTV MEAVTAILGG  420
GLRVGVLLQG KKVRDDNKTL FQTGISHDNQ LDSLGFALEP NPSRTPLVLC QEDSPCILPC  480
DAPEPLTRYS PDVSADHPSS SNVLPEPHGN SLGNFIESDH DSAPSPTDTS NHKSTVDSKA  540
LVTVPAMTAE AISVVPMHRK SKRSEVAQRR IRRPFSVAEV EALVQAVEKL GTGRWRDVKL  600
RAFDNAKHRT YVDLKDKWKT LVHTARISPR QRRGEPVPQE LLDRVLTAHA YWSKQQAKYQ  660
LKRQPERFVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-130	MYB_related family protein