PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022997675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 248aa MW: 28039.9 Da PI: 8.5052 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.3 | 1.5e-09 | 162 | 209 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + +k + ++L +++ Y++sLq XP_022997675.1 162 SHSLAERVRREKINNKLKCLQSLVPGC----HKTMGMTMVLDETITYVHSLQ 209 8*************************9....7779999************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MIEFRQDLHH FKSSKASEER GLNMEVINQF PNMTESMLED FNETDFSEEN FLGYHFQLPE 60 NTTRSSISDF PRLALWKCQN EFPVITRSSP LVDISQQTMN RKSKQVLVSF SGTPCAAFGN 120 NCSVARNLKT LGGRKRRKCE KEQEKHAEVV HIRAKRGEAT HSHSLAERVR REKINNKLKC 180 LQSLVPGCHK TMGMTMVLDE TITYVHSLQN QVEFLSMELA TACSTLGINS GMGATRTASH 240 NIAGDKIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 1e-36 | bHLH family protein |