PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997230.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 297aa MW: 33199.5 Da PI: 6.6292

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.2	1.5e-13	110	161	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_022997230.1 110 QRMTHIAVERNRRKQMNEYLAILRSLMPSS---YVQRGDQASIIGGAINFVKELE 161 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MALEAVVFPQ DPFTYVCRDV CSYGGGGGGA WAGYDHGFQL EQQKPFLGVP ETQTEDTKFA 60 ANWEASPEEC SINQPIPGGA VYTPPPPPST GRRKRRRTRS TKNREEIENQ RMTHIAVERN 120 RRKQMNEYLA ILRSLMPSSY VQRGDQASII GGAINFVKEL EQQLQFINTH KNTIENGGSP 180 FAEFFSFPQY STKNTAHDSS IAHTQWPAGD IEVTMIDTHA NLKILSPKRP RQLLKMVAGF 240 QSLRLTVLHL NVTTSDQMVL YSLSIKVEEG CQLNTVDEIA AAVNQILLFI QEEAALN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	97	RKRRR
2	93	98	RKRRRT
3	111	122	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-88	bHLH family protein