PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997079.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 522aa MW: 55229.7 Da PI: 9.1656

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997079.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.5	2.7e-07	94	138	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l avk+ G g+W+ I r + Rt+ q+ rw XP_022997079.1 94 RKPWSEAEDLELMAAVKKCGEGNWANIIRgdFLS-DRTASQLSQRW 138 789**********************995521344.66666666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MENYFFQVFI SSGSSSDLNV PSSSTIEAPL TISLPRSYRD GVQFENVDPA CSIKGASITV 60 PVSVQRQPVL TPPSVEGLNA NGSTYGNNAS RRKRKPWSEA EDLELMAAVK KCGEGNWANI 120 IRGDFLSDRT ASQLSQRWAI IKKKHGNLTV GANTAGTHLS EVQLAARHAM SLALDRHVVG 180 SLKAARISGS ASTNKIGNGS SLAAVATSDQ VQEKLHQSPT HTKPSPIGSS SLTAKAQVTT 240 SKKMIPKSSF DSDCIVRAAA VAAGARIASP ADAASLLKAA QSKNAIHITA KIPASTKTPT 300 PGRGSNHLEA HPSIKSTTLS NTPAVMPSLS RGVPVKTTSL QTATLSSVPS DQNIAVASVT 360 AAADPLSEKE IKTVEDVRGR GLGGVQTTFQ KNDHCLSRKL LSERVLDEKP ADLGPALKRQ 420 TTETSNCSGS SQNMPTADGY INVETCNQVE ERQNSNTSAV PDSSDQKEIM NQSQVERYKP 480 QDMDVDSDGK DRPITKADGR SENSGHKEAV NEILEGNTAV KS

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MENYFFQVFI SSGSSSDLNV PSSSTIEAPL TISLPRSYRD GVQFENVDPA CSIKGASITV  60
PVSVQRQPVL TPPSVEGLNA NGSTYGNNAS RRKRKPWSEA EDLELMAAVK KCGEGNWANI  120
IRGDFLSDRT ASQLSQRWAI IKKKHGNLTV GANTAGTHLS EVQLAARHAM SLALDRHVVG  180
SLKAARISGS ASTNKIGNGS SLAAVATSDQ VQEKLHQSPT HTKPSPIGSS SLTAKAQVTT  240
SKKMIPKSSF DSDCIVRAAA VAAGARIASP ADAASLLKAA QSKNAIHITA KIPASTKTPT  300
PGRGSNHLEA HPSIKSTTLS NTPAVMPSLS RGVPVKTTSL QTATLSSVPS DQNIAVASVT  360
AAADPLSEKE IKTVEDVRGR GLGGVQTTFQ KNDHCLSRKL LSERVLDEKP ADLGPALKRQ  420
TTETSNCSGS SQNMPTADGY INVETCNQVE ERQNSNTSAV PDSSDQKEIM NQSQVERYKP  480
QDMDVDSDGK DRPITKADGR SENSGHKEAV NEILEGNTAV KS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	6e-38	MYB_related family protein