PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996894.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 345aa    MW: 38000.1 Da    PI: 4.8876
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.3e-102693091055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  XP_022996894.1 269 RKRRERINERLRMLQKLVPNG-----TKVDISTMLEEAVQYVKFLQ 309
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MEALGGFSDG EWEPFAAMFS SEEVDQSHIP IANHADPSTE LQLPNNGGSS WFYSLDAFVP  60
NLQSYCVKQD TRSCSSCITT DNSHAAFLFP NSTDFFTPID EGNFGSSWFS DVLIEEVDKA  120
LYTAATGEDS STERFVEINV VQGNYPALPP PSQLVDSTGA AKEPMALKRK VNNEDISDNQ  180
KKKTRVSADG QKKKKTEERK KNEKRKGKSV EEEGNAGGAS EGQCSISYSS DQEENGSQEG  240
QGATSDGGLI RKGRASRGSA TDPQSLYARK RRERINERLR MLQKLVPNGT KVDISTMLEE  300
AVQYVKFLQL QIKLLSSDEL WMFAPLAYNG LELGLHQKLS PFGSH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181195KKKTRVSADGQKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-38bHLH family protein