PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996770.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 334aa    MW: 37151.9 Da    PI: 6.1721
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.5e-1958107255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa+a++ a+++++g
  XP_022996770.1  58 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAARAYDCAARSMRG 107
                     59*******.**********93....35999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEDSFRRVNT STNNTNTNNP FLDYQIKSNT TTTTAAPTSA TGLKRTLRDH NSTTATMRYR  60
GVRRRPWGRY AAEIRDPQSK ERRWLGTFDT AEEAARAYDC AARSMRGLKA RTNFVYPSSP  120
PPHSVSDEYV IPRFNFPKQS HPGLPRVNAS NWPMFSTPSR GAEFLWSGAQ RINTASPTLD  180
MLLLRDFLNF PSANASNPKP PSLVNNTAAT KIAASPPPDH SVQQQNYYSS QFLPKDSPDS  240
GLLEEIIHGF FPKSENSNSN PHDQSDPAAD ELNSQHSPSF TTDLDLLDYP DCSIQGEFNE  300
GGERAFGNPE NVVVDDIFQC PEVLNAFAAK LENA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.12e-16ERF family protein