PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996613.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 465aa MW: 51513.6 Da PI: 5.6286

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.4	2.1e-07	403	435	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + XP_022996613.1 403 WPYPTEEDKAKLVQETGLQLKQINNWFINQRKR 435 69*****************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MAFRNQLSQD LPLHYENQSQ PERPLSANTL RSILSDQLTD HSQADDGSKP EHPLQSTPNW 60 LNSALLRNQA PHSHFSDETT ATAADNVDTD FLNLHTTAAN SAVSHPSGQW LSRAILHRDH 120 SDVLDEVADA ADAMIGATTL SRESDDLKNN SSGGGGEGAN NSDDVAVESD GNEGAYGGDA 180 VMNWQNARFK AEILAHPLYE QLLSAHVACL RIATPVDQLP RVDSQLARSQ NVAAKYSSFG 240 HRSQPIAGNG KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVYACWEIE QSLQSLTGVS 300 PGEGTGATMS DDDEDQTDSD ANLFDGSFEG HDAMGFGPLI PTDSERSLME RVRHELKHEL 360 KNQGYKEKIL DIREEILRKR RAGKLPGGTT SVLKAWWQSH SNWPYPTEED KAKLVQETGL 420 QLKQINNWFI NQRKRNWHTN PSTSTTLKTK RKRSNAGEAT GNNHP

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MAFRNQLSQD LPLHYENQSQ PERPLSANTL RSILSDQLTD HSQADDGSKP EHPLQSTPNW  60
LNSALLRNQA PHSHFSDETT ATAADNVDTD FLNLHTTAAN SAVSHPSGQW LSRAILHRDH  120
SDVLDEVADA ADAMIGATTL SRESDDLKNN SSGGGGEGAN NSDDVAVESD GNEGAYGGDA  180
VMNWQNARFK AEILAHPLYE QLLSAHVACL RIATPVDQLP RVDSQLARSQ NVAAKYSSFG  240
HRSQPIAGNG KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVYACWEIE QSLQSLTGVS  300
PGEGTGATMS DDDEDQTDSD ANLFDGSFEG HDAMGFGPLI PTDSERSLME RVRHELKHEL  360
KNQGYKEKIL DIREEILRKR RAGKLPGGTT SVLKAWWQSH SNWPYPTEED KAKLVQETGL  420
QLKQINNWFI NQRKRNWHTN PSTSTTLKTK RKRSNAGEAT GNNHP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	433	453	RKRNWHTNPSTSTTLKTKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-160	TALE family protein