PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996557.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CPP

Protein Properties

Length: 684aa MW: 75965.7 Da PI: 5.2521

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.3	4.7e-16	348	387	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 + k+C+C+kskClk+YC+Cfaag +Cse+C+C++C+N+ + XP_022996557.1 348 DAKRCSCTKSKCLKLYCDCFAAGMYCSESCSCQGCFNNPK 387 5799*********************************987 PP
2	TCR	45.8	1.2e-14	434	473	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++kkgC+C ks C k+YCeCf+a++ C+e+C+C+dC+N++ XP_022996557.1 434 RHKKGCKCIKSMCSKQYCECFQANVGCTERCRCNDCRNDH 473 589***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 684 aa Download sequence
MDSPKTVPLT PTLTTISSTV TLPTSLSESP WDSFSEFVDN ILLVEPNQSD YGAATGFIED 60 ESPPLVFSSP ELNAENVDSM ISKRTPNFES SNTAQIEAYC NTDLVDDILA ELQEAYKEQG 120 NEDLCEQDGS AIYQDYSDFV PRSFNERLCN ATSHGAYECN SNDAFWRAFQ VGQPLHGMRQ 180 RYLQSKEAAA SAPQNNFPSN YTINAEMTTQ YPCLVEDTEL SVMNFEATFN NRVPAAANSS 240 HLVRTPLRPT SVGNPLLQVP KPSGIGLHPN SVIDVAMKNH VPITNCSVQN RHENKAISLP 300 SSFILEPCNA AVKAETSETP YDTRDFKISK VLPRRKRKKS SVNNNGDDAK RCSCTKSKCL 360 KLYCDCFAAG MYCSESCSCQ GCFNNPKNLQ TVLETRHQIE TRDPLAFAPT VIEDRNELPV 420 NNENGSLSTP SLARHKKGCK CIKSMCSKQY CECFQANVGC TERCRCNDCR NDHGKREVNC 480 NEKELKFHAT PEVVATGKAD VGSVEGSLSY EHDISPSEFY SQRLNSPQTP SFQYSGYEKD 540 PLKSWIVAGI FRPSPEFDTA SSSSPDCYDM FVESNTDIMD ANSCQWQQQI NSTPFIPSKP 600 KGCTSMSRID QLRVGSSSPD TPPVQEGKKA SINGGSPETN MAFPPHYGNN EYEVGMNNSL 660 GRMERRRYIL KSMPPFPHLT PRDR

Sequence ? help Back to Top

Protein Sequence Length: 684 aa Download sequence

MDSPKTVPLT PTLTTISSTV TLPTSLSESP WDSFSEFVDN ILLVEPNQSD YGAATGFIED  60
ESPPLVFSSP ELNAENVDSM ISKRTPNFES SNTAQIEAYC NTDLVDDILA ELQEAYKEQG  120
NEDLCEQDGS AIYQDYSDFV PRSFNERLCN ATSHGAYECN SNDAFWRAFQ VGQPLHGMRQ  180
RYLQSKEAAA SAPQNNFPSN YTINAEMTTQ YPCLVEDTEL SVMNFEATFN NRVPAAANSS  240
HLVRTPLRPT SVGNPLLQVP KPSGIGLHPN SVIDVAMKNH VPITNCSVQN RHENKAISLP  300
SSFILEPCNA AVKAETSETP YDTRDFKISK VLPRRKRKKS SVNNNGDDAK RCSCTKSKCL  360
KLYCDCFAAG MYCSESCSCQ GCFNNPKNLQ TVLETRHQIE TRDPLAFAPT VIEDRNELPV  420
NNENGSLSTP SLARHKKGCK CIKSMCSKQY CECFQANVGC TERCRCNDCR NDHGKREVNC  480
NEKELKFHAT PEVVATGKAD VGSVEGSLSY EHDISPSEFY SQRLNSPQTP SFQYSGYEKD  540
PLKSWIVAGI FRPSPEFDTA SSSSPDCYDM FVESNTDIMD ANSCQWQQQI NSTPFIPSKP  600
KGCTSMSRID QLRVGSSSPD TPPVQEGKKA SINGGSPETN MAFPPHYGNN EYEVGMNNSL  660
GRMERRRYIL KSMPPFPHLT PRDR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	335	339	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22760.1	2e-47	CPP family protein