PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996448.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 368aa MW: 41831.9 Da PI: 4.7894

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996448.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.9	1.8e-34	45	137	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++e++ed+ +++++sws+ nsf+v+d ++f++++Lp+yFkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F g+++ll++ XP_022996448.1 45 FLTKTFEMVEDPLTDSIVSWSKARNSFIVWDYHKFSSSLLPRYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLGGQRHLLRT 130 9**************************************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 ikr++++ XP_022996448.1 131 IKRRRHS 137 *9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MDEMKVKPEE SVAVGTAVCS SSSSSGSSVT PQPIEGIHDV GPPPFLTKTF EMVEDPLTDS 60 IVSWSKARNS FIVWDYHKFS SSLLPRYFKH SNFSSFVRQL NTYGFRKVDP DRWEFANEGF 120 LGGQRHLLRT IKRRRHSPQS FQHHQGGICV ELGEFGLEGE LERLKRDRSS LMAELVRLRQ 180 QHQSSREQII AMEDRLEKSE NKQKQIMTFL SKALKNPSFV QKFIHSNQGR ELRGVEIGRK 240 RRLTSSSSVE NLQEESVPVA VKQEEPDMET LLAVNFEGES NGEITDPVSD GILMAAMDVG 300 HSAPEELGFF SQLWAEDPWA GYPEEEPIIV SNQSDIDVEV EDLIAEPPDW PENLQELVDQ 360 MEFLRPKP

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MDEMKVKPEE SVAVGTAVCS SSSSSGSSVT PQPIEGIHDV GPPPFLTKTF EMVEDPLTDS  60
IVSWSKARNS FIVWDYHKFS SSLLPRYFKH SNFSSFVRQL NTYGFRKVDP DRWEFANEGF  120
LGGQRHLLRT IKRRRHSPQS FQHHQGGICV ELGEFGLEGE LERLKRDRSS LMAELVRLRQ  180
QHQSSREQII AMEDRLEKSE NKQKQIMTFL SKALKNPSFV QKFIHSNQGR ELRGVEIGRK  240
RRLTSSSSVE NLQEESVPVA VKQEEPDMET LLAVNFEGES NGEITDPVSD GILMAAMDVG  300
HSAPEELGFF SQLWAEDPWA GYPEEEPIIV SNQSDIDVEV EDLIAEPPDW PENLQELVDQ  360
MEFLRPKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-108	HSF family protein