PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996378.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 538aa MW: 60451.3 Da PI: 5.1847

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996378.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.1	8.6e-28	303	356	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022996378.1 303 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 356 6799***************.******************************8 PP
2	Myb_DNA-binding	42.2	1.9e-13	306	355	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022996378.1 306 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 355 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MVCTADDLQE WKDFPKGLRV LLLDRDSRSA TEIRAKLEEM EHVVYYCNDE KEALSAIMNT 60 PENFHIAILE MCEGNYDESF KLLGSSKDLP IIMTSDVYCL STMMKCIALG AVEFLLKPLS 120 EDKLRNIWQH VLHKAFSSTP KPEVDSAASL MQLQLESEDN NGVLEDTEGL SWIQDIVWEQ 180 EQPEGNVNSQ LNQGSSMQGC WESGDQMNCP METDCSDKDV QSNFVETTSH DLVCEDTLQE 240 RQPRLSGNVM VKEDENSAVG LIAESDIYLP LQNKCGVKSG PSAAEHSIQG SDVNPSAGSK 300 SKKTKVDWSP ELHRKFIQAV EQLGIDRAIP SKILELMKVE GLTRHNVASH LQKYRMQKKH 360 AVHREENPRF SMLTNHLKPN MAYLSYYPYC GISMSAVYRT WIQNNGQPAS VNMWGPPDYR 420 HWPQPGTQPW NSYAGMQADA WGCPVMLPSR APYFSYPQQI SSSHNVYTAN ESYGTPHSSF 480 DIQPDEELID KIVKEARRKP LSPLPLGLKP PSAESVLKEL SKKGISTVPP RINGSKPP

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MVCTADDLQE WKDFPKGLRV LLLDRDSRSA TEIRAKLEEM EHVVYYCNDE KEALSAIMNT  60
PENFHIAILE MCEGNYDESF KLLGSSKDLP IIMTSDVYCL STMMKCIALG AVEFLLKPLS  120
EDKLRNIWQH VLHKAFSSTP KPEVDSAASL MQLQLESEDN NGVLEDTEGL SWIQDIVWEQ  180
EQPEGNVNSQ LNQGSSMQGC WESGDQMNCP METDCSDKDV QSNFVETTSH DLVCEDTLQE  240
RQPRLSGNVM VKEDENSAVG LIAESDIYLP LQNKCGVKSG PSAAEHSIQG SDVNPSAGSK  300
SKKTKVDWSP ELHRKFIQAV EQLGIDRAIP SKILELMKVE GLTRHNVASH LQKYRMQKKH  360
AVHREENPRF SMLTNHLKPN MAYLSYYPYC GISMSAVYRT WIQNNGQPAS VNMWGPPDYR  420
HWPQPGTQPW NSYAGMQADA WGCPVMLPSR APYFSYPQQI SSSHNVYTAN ESYGTPHSSF  480
DIQPDEELID KIVKEARRKP LSPLPLGLKP PSAESVLKEL SKKGISTVPP RINGSKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	4e-91	ARR-B family protein