PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996372.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 333aa    MW: 36814.2 Da    PI: 4.5161
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.22e-36251162102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++lisw+e+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ Fk+g+k ll++
  XP_022996372.1  25 FLTKTYQLVDDPDVDDLISWNEDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFKRGEKALLRD 110
                     9*****************************************************************99.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_022996372.1 111 IQRRKV 116
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MAPSPAEPIG DSGTGDSQRS IPTPFLTKTY QLVDDPDVDD LISWNEDGST FIVWRPAEFA  60
RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANDCF KRGEKALLRD IQRRKVAVSV  120
AAPATPASVS VPLVTVAASP AVAACVISPV NSAEEQVTSS NSSPMEFQRV TSCCTTPELV  180
RENERLRKEN MQLSHELTQL KGLCNNILSL MTNYASGHQQ LESVSVRDGK ALELLPARQM  240
MDDEGAVSDG IQEVRLKVEE AVAEGRTPKL FGVSIGVKRV RREEEDEEMM GPNHVQLEEC  300
ETGSEIKAEP LDENSENPEG SASQWLELGN QGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.11e-103HSF family protein