PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996083.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 698aa MW: 78035.9 Da PI: 10.1213

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.7	1.3e-08	10	62	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqky 47 ++W t E++ll+ av+++G+ +W+++a ++ +t+ +c+ +++++ XP_022996083.1 10 KPWGTLEELLLASAVNRHGTTSWDSVAMEIHnrcsqssSSLTPQDCRIKFHDL 62 69*****************************7777777777777777777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MVVQRETNTK PWGTLEELLL ASAVNRHGTT SWDSVAMEIH NRCSQSSSSL TPQDCRIKFH 60 DLKRRFLSQN DLDSDSTSLM PILEELRKIR VEELRRDVQR RDVLIVSLEM KVKRLEEERD 120 RSFNEPDGGP DLDVNAVDTN LCPLNPTPSG DDSDDRENRS LDESNSTSKK KEEGVGQNGV 180 VRERPISETV KITKKKETGA ARTGDEPEAE REKESAAGGG YKRREKKERN WGNSKGKASA 240 VGDSNEAWES VSESKQEGTE GAVAKQQSSD VQSSAGLSQR KRCRSRGGNG TSSGEEPEVS 300 PAKPKPKPNP KSKPNPKPNS NPAAVKSEPL LKFLEIIRSH RLGSAFERRL RSQESDRYKK 360 LIRQHIDLRT IHSRVVKGAY ADSIHRFFRD LLLLFNNAVI FFHRSSPENG AAVKLRALVL 420 KEMKDRIRKP QPPIVAKSKP KQEADVSSSK PRKPSATMVV CRKRDSVSQT SDVGGKKSEN 480 NSREGEGKRK GNDCSEIKIY EKGTWKKGLN LKERGRPGVG NSGARSCRTT TNKKNGEVKH 540 EYGGNELSSH DGMGVRMEKK EKEKGTKKKQ VAVRFLKRMK QNSPSEATDE DGDGSEDESL 600 KEEEEEEEEE EEEEEEEEEE EEEEEEKKRK MKKQNEGKRE RVRRSGGGGG GGGGGGRGGG 660 RGKRGVGRPP KKAETVSVKR QQREEVVGGS KPRKRSRR

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MVVQRETNTK PWGTLEELLL ASAVNRHGTT SWDSVAMEIH NRCSQSSSSL TPQDCRIKFH  60
DLKRRFLSQN DLDSDSTSLM PILEELRKIR VEELRRDVQR RDVLIVSLEM KVKRLEEERD  120
RSFNEPDGGP DLDVNAVDTN LCPLNPTPSG DDSDDRENRS LDESNSTSKK KEEGVGQNGV  180
VRERPISETV KITKKKETGA ARTGDEPEAE REKESAAGGG YKRREKKERN WGNSKGKASA  240
VGDSNEAWES VSESKQEGTE GAVAKQQSSD VQSSAGLSQR KRCRSRGGNG TSSGEEPEVS  300
PAKPKPKPNP KSKPNPKPNS NPAAVKSEPL LKFLEIIRSH RLGSAFERRL RSQESDRYKK  360
LIRQHIDLRT IHSRVVKGAY ADSIHRFFRD LLLLFNNAVI FFHRSSPENG AAVKLRALVL  420
KEMKDRIRKP QPPIVAKSKP KQEADVSSSK PRKPSATMVV CRKRDSVSQT SDVGGKKSEN  480
NSREGEGKRK GNDCSEIKIY EKGTWKKGLN LKERGRPGVG NSGARSCRTT TNKKNGEVKH  540
EYGGNELSSH DGMGVRMEKK EKEKGTKKKQ VAVRFLKRMK QNSPSEATDE DGDGSEDESL  600
KEEEEEEEEE EEEEEEEEEE EEEEEEKKRK MKKQNEGKRE RVRRSGGGGG GGGGGGRGGG  660
RGKRGVGRPP KKAETVSVKR QQREEVVGGS KPRKRSRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	4e-61	MYB_related family protein