PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022995936.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 450aa MW: 50880.3 Da PI: 5.7367

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022995936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.6	1.2e-27	215	268	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022995936.1 215 KTKVDWSPELHRKFIRAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 268 6799***************.******************************8 PP
2	Myb_DNA-binding	41.6	2.8e-13	218	267	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022995936.1 218 VDWSPELHRKFIRAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 267 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MLRCGPQSDF RCLLPKYHDE VHCIEFLLKP LSEDKLRNIW QHVLHKAFSS TPKPEVDSAA 60 SLMQLQLESE DNTGVLEDTE VLSWIQDVVW EQEQPEGSVI YQLNQGSSLQ GCWESENQMN 120 RPMETDCSDK DVRSNFVETA SHDLVCEDTL QEGQPRLSGE VMLEGDRNFV VGLNAESDLY 180 LPLQNKSGVK SGPSAAEHSI QGSDVNPSAS SKARKTKVDW SPELHRKFIR AVEQLGIDRA 240 IPSKILELMK VEGLTRHNVA SHLQKYRMQR KHVMQREENL TRYSMQTNHS PPIMAYPSYP 300 YCGISMSTVY RTWTQTNGHP ANVNMRGPPD YRHWPQPGTQ PWNSYAGMQA DAWGCPVMLP 360 SRAPYFSYPQ QISASHNVYT ANKGYGTPQI SFDLQPNEEL IDEIVNEAKR KPWSPLPLGL 420 KPPSAEILVE ELPKQGISTL TPQINAFNPP

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MLRCGPQSDF RCLLPKYHDE VHCIEFLLKP LSEDKLRNIW QHVLHKAFSS TPKPEVDSAA  60
SLMQLQLESE DNTGVLEDTE VLSWIQDVVW EQEQPEGSVI YQLNQGSSLQ GCWESENQMN  120
RPMETDCSDK DVRSNFVETA SHDLVCEDTL QEGQPRLSGE VMLEGDRNFV VGLNAESDLY  180
LPLQNKSGVK SGPSAAEHSI QGSDVNPSAS SKARKTKVDW SPELHRKFIR AVEQLGIDRA  240
IPSKILELMK VEGLTRHNVA SHLQKYRMQR KHVMQREENL TRYSMQTNHS PPIMAYPSYP  300
YCGISMSTVY RTWTQTNGHP ANVNMRGPPD YRHWPQPGTQ PWNSYAGMQA DAWGCPVMLP  360
SRAPYFSYPQ QISASHNVYT ANKGYGTPQI SFDLQPNEEL IDEIVNEAKR KPWSPLPLGL  420
KPPSAEILVE ELPKQGISTL TPQINAFNPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	6e-51	ARR-B family protein