PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022995933.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 469aa MW: 53005.9 Da PI: 5.9206

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022995933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.5	1.3e-27	234	287	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022995933.1 234 KTKVDWSPELHRKFIRAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 287 6799***************.******************************8 PP
2	Myb_DNA-binding	41.6	3e-13	237	286	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022995933.1 237 VDWSPELHRKFIRAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 286 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MMVEREKKLQ PRRMFVDAAN SCLFHFFLIA IYAEVRTAIL GAVEFLLKPL SEDKLRNIWQ 60 HVLHKAFSST PKPEVDSAAS LMQLQLESED NTGVLEDTEV LSWIQDVVWE QEQPEGSVIY 120 QLNQGSSLQG CWESENQMNR PMETDCSDKD VRSNFVETAS HDLVCEDTLQ EGQPRLSGEV 180 MLEGDRNFVV GLNAESDLYL PLQNKSGVKS GPSAAEHSIQ GSDVNPSASS KARKTKVDWS 240 PELHRKFIRA VEQLGIDRAI PSKILELMKV EGLTRHNVAS HLQKYRMQRK HVMQREENLT 300 RYSMQTNHSP PIMAYPSYPY CGISMSTVYR TWTQTNGHPA NVNMRGPPDY RHWPQPGTQP 360 WNSYAGMQAD AWGCPVMLPS RAPYFSYPQQ ISASHNVYTA NKGYGTPQIS FDLQPNEELI 420 DEIVNEAKRK PWSPLPLGLK PPSAEILVEE LPKQGISTLT PQINAFNPP

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MMVEREKKLQ PRRMFVDAAN SCLFHFFLIA IYAEVRTAIL GAVEFLLKPL SEDKLRNIWQ  60
HVLHKAFSST PKPEVDSAAS LMQLQLESED NTGVLEDTEV LSWIQDVVWE QEQPEGSVIY  120
QLNQGSSLQG CWESENQMNR PMETDCSDKD VRSNFVETAS HDLVCEDTLQ EGQPRLSGEV  180
MLEGDRNFVV GLNAESDLYL PLQNKSGVKS GPSAAEHSIQ GSDVNPSASS KARKTKVDWS  240
PELHRKFIRA VEQLGIDRAI PSKILELMKV EGLTRHNVAS HLQKYRMQRK HVMQREENLT  300
RYSMQTNHSP PIMAYPSYPY CGISMSTVYR TWTQTNGHPA NVNMRGPPDY RHWPQPGTQP  360
WNSYAGMQAD AWGCPVMLPS RAPYFSYPQQ ISASHNVYTA NKGYGTPQIS FDLQPNEELI  420
DEIVNEAKRK PWSPLPLGLK PPSAEILVEE LPKQGISTLT PQINAFNPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	2e-54	ARR-B family protein