PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022995859.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 587aa MW: 64943.6 Da PI: 7.3429

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022995859.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.2	1.3e-07	412	446	16	55
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +N++f Lr++lP a +K++ a+iL +veY+k+L+ XP_022995859.1 412 LNDKFIILRSILPFA-----TKMDQASILGDTVEYLKHLR 446 7************.....9***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MEGLLQLAVQ SVEWTYSLYW RFSTQHRVLV WGDGFYNGPI KTTKTLHPAA ATDFTGHHQQ 60 LQQQQLQLQA ASLSLQRTHQ LRDLYNSLSA ADSSTHAHPL RRPSAALSPE DLTESEWFYL 120 LCLSFSFPPG LGLPGKAFAK NKHVWITGAN EIDSKIFSRA ILAKSAGIKT VVCIPVMDGV 180 VELGTTDKVN EDIALVQHMK SVFAATQWAA PKPALSQLST SNSATSLEHY TNRKELEDEM 240 DSDSSTSNTN SNSNSNAAGG GEPSELIMQL ELSEDIRLGS RSPDDTSNNF LPLPHSPPPH 300 FHIHPPPLGN SPAAVAVLTE EDTHYSNTLS ALLLNQSSRW PDSSSITTVT CSTISAFSKW 360 TRCSDLRRVS MGTTSTSQRL LKNILHTVPF LHTKHHCDHN PSKSKSCDGR WLNDKFIILR 420 SILPFATKMD QASILGDTVE YLKHLRQKIQ DLEAQNREFE SSRKASFEEL QRMDVQSKRK 480 VRILEGVVDG CTKQKAVESP KTNLQVSIIG SEGLLEVQCP YKEGLLLDIL LILQGLRIET 540 TAVRSSSSNG VFIAELRAKV KEGMDGKKAS ILEVKRAIQQ IIPCVDT

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MEGLLQLAVQ SVEWTYSLYW RFSTQHRVLV WGDGFYNGPI KTTKTLHPAA ATDFTGHHQQ  60
LQQQQLQLQA ASLSLQRTHQ LRDLYNSLSA ADSSTHAHPL RRPSAALSPE DLTESEWFYL  120
LCLSFSFPPG LGLPGKAFAK NKHVWITGAN EIDSKIFSRA ILAKSAGIKT VVCIPVMDGV  180
VELGTTDKVN EDIALVQHMK SVFAATQWAA PKPALSQLST SNSATSLEHY TNRKELEDEM  240
DSDSSTSNTN SNSNSNAAGG GEPSELIMQL ELSEDIRLGS RSPDDTSNNF LPLPHSPPPH  300
FHIHPPPLGN SPAAVAVLTE EDTHYSNTLS ALLLNQSSRW PDSSSITTVT CSTISAFSKW  360
TRCSDLRRVS MGTTSTSQRL LKNILHTVPF LHTKHHCDHN PSKSKSCDGR WLNDKFIILR  420
SILPFATKMD QASILGDTVE YLKHLRQKIQ DLEAQNREFE SSRKASFEEL QRMDVQSKRK  480
VRILEGVVDG CTKQKAVESP KTNLQVSIIG SEGLLEVQCP YKEGLLLDIL LILQGLRIET  540
TAVRSSSSNG VFIAELRAKV KEGMDGKKAS ILEVKRAIQQ IIPCVDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	2e-45	bHLH family protein