PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022995704.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 208aa    MW: 24301.2 Da    PI: 9.0692
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022995704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.61e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+s+
  XP_022995704.1  9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSN 59
                    79***********************************************95 PP
2K-box72.41.3e-2476168898
           K-box   8 s..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                         +++  e  q e + + k+++ L+  +R+l+G++L+ +s++eLqqLe+q+e+sl+kiRs+K++ll+e+i +l++ ek+l een aL kk+
  XP_022995704.1  76 MmcSNNQGLEDVQLEKDCMTKKLQHLEVCKRKLMGDGLDLCSMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKV 168
                     344556778999******************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MVRGKTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSNC  60
SMNKTIDRYQ NRTKEMMCSN NQGLEDVQLE KDCMTKKLQH LEVCKRKLMG DGLDLCSMEE  120
LQQLERQIER SLTKIRSRKY QLLKEEITKL KEEEKMLLEE NAALLKKVGS EWKHQEEAMD  180
VETQLFIGPS ERRGGSGFLC RYLHNQPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.18e-57MIKC_MADS family protein