PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022995109.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 342aa    MW: 37306.7 Da    PI: 7.391
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022995109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.15.3e-32170226158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+Rg+gGrF
  XP_022995109.1 170 QEPVFVNAKQYQGILRRRQARAKAEVENKL-IKVRKPYLHESRHQHAMRRARGTGGRF 226
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MQSKSKSVNQ VESEPPNMQQ TGSYSEPWWR SIGYNPIYPS ATGGNVSNSP SLECTNGASE  60
SNDGQSMSNA DLNEDDDDDD TTKETQAASY GQSQHNNQHA VSTAPRVHGG CITQPPQLEL  120
VGHSIACASN QYQDPYYAGL MAAYGHQPMG YPPFIGMPHA RMALPLEVAQ EPVFVNAKQY  180
QGILRRRQAR AKAEVENKLI KVRKPYLHES RHQHAMRRAR GTGGRFAKKN EAKSLSSTMK  240
NKESGSGQAI SSSSSGSEAV PGALTETWNS SNSQQEARAQ LHESYEARSY VNGNSHFHNY  300
SSFQASSYAL LSGERGEDGD CSGQQRGSIS ENQAAQRRLA IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.16e-75NF-YA family protein