PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994379.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 541aa MW: 58760.7 Da PI: 5.4856

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.4e-11	357	399	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_022994379.1 357 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 399 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MISGVGSVVW MENREDEGSA SWTSNNTHNH LNHPAANCSV SDNKDQISSL STFKSMLEVE 60 DDWCIASNAL HDISFSQNFT DPPDNLLLPH GDSSSSCSPS SSVFNNIDPS QLQFFLPPTR 120 TLSSLYKVIG NNNPLDHGFD FGAEVGFLDV QASNTSALLS SGGELLTGFT GLSPTSQMNS 180 PNMCLGSQLT TPNLPQITGN CSGLAGFQSL DENLGNALLL NRSKLLRPLE SFPSVGTQPT 240 LFQKRAALRK SLADKGSNLE VLSPDGGWYS NRIEGGVGKN EVGDENAKRK MILADELQDA 300 SIDTARFNYD SDDFTENSDP KLDESGRNVG NTSNANSTVT GGDQKGKKKG LPAKNLMAER 360 RRRKKLNDRL YMLRSVVPKI SKMDRASILG DAIEYLKELL QRINDLHNEL EFAPSGTALT 420 PSTSFHPLTP TPPTLSSRIK EELCPSSFPS PNSQPARVEV RVREGRAVNI HMFCGRRPGL 480 LLSSVRALDN LGLDIQQAVI SCFNGFAMDI FRAEQCSEGQ DVHPEQIKAI LLHSVGFNGA 540 T

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MISGVGSVVW MENREDEGSA SWTSNNTHNH LNHPAANCSV SDNKDQISSL STFKSMLEVE  60
DDWCIASNAL HDISFSQNFT DPPDNLLLPH GDSSSSCSPS SSVFNNIDPS QLQFFLPPTR  120
TLSSLYKVIG NNNPLDHGFD FGAEVGFLDV QASNTSALLS SGGELLTGFT GLSPTSQMNS  180
PNMCLGSQLT TPNLPQITGN CSGLAGFQSL DENLGNALLL NRSKLLRPLE SFPSVGTQPT  240
LFQKRAALRK SLADKGSNLE VLSPDGGWYS NRIEGGVGKN EVGDENAKRK MILADELQDA  300
SIDTARFNYD SDDFTENSDP KLDESGRNVG NTSNANSTVT GGDQKGKKKG LPAKNLMAER  360
RRRKKLNDRL YMLRSVVPKI SKMDRASILG DAIEYLKELL QRINDLHNEL EFAPSGTALT  420
PSTSFHPLTP TPPTLSSRIK EELCPSSFPS PNSQPARVEV RVREGRAVNI HMFCGRRPGL  480
LLSSVRALDN LGLDIQQAVI SCFNGFAMDI FRAEQCSEGQ DVHPEQIKAI LLHSVGFNGA  540
T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	347	365	KKKGLPAKNLMAERRRRKK
2	359	366	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-103	bHLH family protein